Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
YBX1P67809 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.23□□□□□ -1.41
YBX1P67809 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
YBX1P67809 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC6.23□□□□□ -1.41
YBX1P67809 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
YBX1P67809 AP000547.3-204ENST00000588548 2523 ntBASIC6.23□□□□□ -1.41
YBX1P67809 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
YBX1P67809 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
YBX1P67809 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.22□□□□□ -1.41
YBX1P67809 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
YBX1P67809 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
YBX1P67809 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
YBX1P67809 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
YBX1P67809 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.22□□□□□ -1.41
YBX1P67809 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.22□□□□□ -1.41
YBX1P67809 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.22□□□□□ -1.41
YBX1P67809 PDZK1P1-202ENST00000425209 1350 ntBASIC6.22□□□□□ -1.41
YBX1P67809 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.22□□□□□ -1.41
YBX1P67809 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
YBX1P67809 AC093909.5-201ENST00000621839 1799 ntBASIC6.22□□□□□ -1.41
YBX1P67809 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
YBX1P67809 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
YBX1P67809 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
YBX1P67809 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
YBX1P67809 OR4G2P-201ENST00000328113 903 ntBASIC6.22□□□□□ -1.41
YBX1P67809 Y_RNA.303-201ENST00000364998 94 ntBASIC6.22□□□□□ -1.41
YBX1P67809 SNORD65-201ENST00000391079 73 ntBASIC6.22□□□□□ -1.41
YBX1P67809 AP003170.5-201ENST00000397185 335 ntBASIC6.22□□□□□ -1.41
YBX1P67809 AL023284.3-201ENST00000407767 334 ntBASIC6.22□□□□□ -1.41
YBX1P67809 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
YBX1P67809 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.22□□□□□ -1.41
YBX1P67809 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
YBX1P67809 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.22□□□□□ -1.41
YBX1P67809 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.22□□□□□ -1.41
YBX1P67809 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.22□□□□□ -1.41
YBX1P67809 CCNB1IP1P2-201ENST00000432876 818 ntBASIC6.22□□□□□ -1.41
YBX1P67809 AL590103.1-201ENST00000434488 307 ntBASIC6.22□□□□□ -1.41
YBX1P67809 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.22□□□□□ -1.41
YBX1P67809 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC6.22□□□□□ -1.41
YBX1P67809 EMC3-AS1-205ENST00000438698 534 ntBASIC6.22□□□□□ -1.41
YBX1P67809 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.22□□□□□ -1.41
YBX1P67809 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.22□□□□□ -1.41
YBX1P67809 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.22□□□□□ -1.41
YBX1P67809 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC6.22□□□□□ -1.41
YBX1P67809 RN7SL39P-201ENST00000462264 297 ntBASIC6.22□□□□□ -1.41
YBX1P67809 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
YBX1P67809 AC011979.1-201ENST00000472300 483 ntBASIC6.22□□□□□ -1.41
YBX1P67809 AC098818.1-201ENST00000478593 252 ntBASIC6.22□□□□□ -1.41
YBX1P67809 AC037198.2-201ENST00000478845 733 ntBASIC6.22□□□□□ -1.41
YBX1P67809 GAPDHP36-201ENST00000480688 918 ntBASIC6.22□□□□□ -1.41
YBX1P67809 OR4G11P-201ENST00000492842 939 ntBASIC6.22□□□□□ -1.41
YBX1P67809 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC6.22□□□□□ -1.41
YBX1P67809 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC6.22□□□□□ -1.41
YBX1P67809 RNA5SP418-201ENST00000515951 117 ntBASIC6.22□□□□□ -1.41
YBX1P67809 RNU6-678P-201ENST00000516832 109 ntBASIC6.22□□□□□ -1.41
YBX1P67809 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC6.22□□□□□ -1.41
YBX1P67809 AC106038.2-201ENST00000520706 568 ntBASIC6.22□□□□□ -1.41
YBX1P67809 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.22□□□□□ -1.41
YBX1P67809 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC6.22□□□□□ -1.41
YBX1P67809 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC6.22□□□□□ -1.41
YBX1P67809 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC6.22□□□□□ -1.41
YBX1P67809 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.22□□□□□ -1.41
YBX1P67809 AC007954.1-201ENST00000554198 494 ntBASIC6.22□□□□□ -1.41
YBX1P67809 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC6.22□□□□□ -1.41
YBX1P67809 TPRX1P1-201ENST00000557620 319 ntBASIC6.22□□□□□ -1.41
YBX1P67809 AC018558.5-201ENST00000565840 952 ntBASIC6.22□□□□□ -1.41
YBX1P67809 AC079171.1-201ENST00000568788 914 ntBASIC6.22□□□□□ -1.41
YBX1P67809 SNORA59B-202ENST00000578183 701 ntBASIC6.22□□□□□ -1.41
YBX1P67809 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.22□□□□□ -1.41
YBX1P67809 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC6.22□□□□□ -1.41
YBX1P67809 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.22□□□□□ -1.41
YBX1P67809 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.22□□□□□ -1.41
YBX1P67809 AC091805.2-201ENST00000603848 235 ntBASIC6.22□□□□□ -1.41
YBX1P67809 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.22□□□□□ -1.41
YBX1P67809 AC091946.2-201ENST00000606105 291 ntBASIC6.22□□□□□ -1.41
YBX1P67809 AL589743.6-201ENST00000611025 117 ntBASIC6.22□□□□□ -1.41
YBX1P67809 AC024255.1-201ENST00000614376 102 ntBASIC6.22□□□□□ -1.41
YBX1P67809 MIR6778-201ENST00000617912 73 ntBASIC6.22□□□□□ -1.41
YBX1P67809 MIR6085-201ENST00000618314 110 ntBASIC6.22□□□□□ -1.41
YBX1P67809 AC005840.5-201ENST00000619166 599 ntBASIC6.22□□□□□ -1.41
YBX1P67809 MIR7854-201ENST00000620068 65 ntBASIC6.22□□□□□ -1.41
YBX1P67809 AC004836.1-201ENST00000623032 634 ntBASIC6.22□□□□□ -1.41
YBX1P67809 AC010435.1-201ENST00000623353 1177 ntBASIC6.22□□□□□ -1.41
YBX1P67809 AC099654.12-201ENST00000639868 649 ntBASIC6.22□□□□□ -1.41
YBX1P67809 LINC01808-202ENST00000641680 1116 ntBASIC6.22□□□□□ -1.41
YBX1P67809 AL121936.2-201ENST00000641935 662 ntBASIC6.22□□□□□ -1.41
YBX1P67809 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
YBX1P67809 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
YBX1P67809 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
YBX1P67809 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
YBX1P67809 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
YBX1P67809 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
YBX1P67809 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
YBX1P67809 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
YBX1P67809 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.22□□□□□ -1.41
YBX1P67809 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
YBX1P67809 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
YBX1P67809 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
YBX1P67809 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
YBX1P67809 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms