Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LMO4P61968 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LMO4P61968 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LMO4P61968 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.4□□□□□ -1.7
LMO4P61968 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
LMO4P61968 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.4□□□□□ -1.7
LMO4P61968 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LMO4P61968 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
LMO4P61968 AL359715.3-201ENST00000569267 2123 ntBASIC4.4□□□□□ -1.7
LMO4P61968 AC114774.1-201ENST00000507410 1770 ntBASIC4.4□□□□□ -1.7
LMO4P61968 AC034229.2-201ENST00000566945 2508 ntBASIC4.4□□□□□ -1.7
LMO4P61968 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LMO4P61968 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
LMO4P61968 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
LMO4P61968 AC006206.1-201ENST00000544842 3387 ntBASIC4.4□□□□□ -1.7
LMO4P61968 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
LMO4P61968 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
LMO4P61968 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LMO4P61968 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.4□□□□□ -1.71
LMO4P61968 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.4□□□□□ -1.71
LMO4P61968 UBE2V1P15-201ENST00000407776 448 ntBASIC4.4□□□□□ -1.71
LMO4P61968 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.4□□□□□ -1.71
LMO4P61968 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.4□□□□□ -1.71
LMO4P61968 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.4□□□□□ -1.71
LMO4P61968 AL590399.4-201ENST00000436561 601 ntBASIC4.4□□□□□ -1.71
LMO4P61968 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.4□□□□□ -1.71
LMO4P61968 H3F3BP1-201ENST00000440551 403 ntBASIC4.4□□□□□ -1.71
LMO4P61968 AC073465.2-201ENST00000440938 498 ntBASIC4.4□□□□□ -1.71
LMO4P61968 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC4.4□□□□□ -1.71
LMO4P61968 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.4□□□□□ -1.71
LMO4P61968 RAB28P3-201ENST00000448325 597 ntBASIC4.4□□□□□ -1.71
LMO4P61968 AC090114.3-201ENST00000479267 829 ntBASIC4.4□□□□□ -1.71
LMO4P61968 AK4P6-201ENST00000505168 528 ntBASIC4.4□□□□□ -1.71
LMO4P61968 NDUFB5P1-201ENST00000508134 564 ntBASIC4.4□□□□□ -1.71
LMO4P61968 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.4□□□□□ -1.71
LMO4P61968 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.4□□□□□ -1.71
LMO4P61968 SCARNA20.4-201ENST00000516969 131 ntBASIC4.4□□□□□ -1.71
LMO4P61968 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.4□□□□□ -1.71
LMO4P61968 SEC11B-201ENST00000518383 499 ntBASIC4.4□□□□□ -1.71
LMO4P61968 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.4□□□□□ -1.71
LMO4P61968 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.4□□□□□ -1.71
LMO4P61968 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.4□□□□□ -1.71
LMO4P61968 DUX4L52-201ENST00000549363 777 ntBASIC4.4□□□□□ -1.71
LMO4P61968 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.4□□□□□ -1.71
LMO4P61968 LINC00557-201ENST00000563184 1279 ntBASIC4.4□□□□□ -1.71
LMO4P61968 AC009962.1-201ENST00000567327 3813 ntBASIC4.4□□□□□ -1.71
LMO4P61968 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.4□□□□□ -1.71
LMO4P61968 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.4□□□□□ -1.71
LMO4P61968 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.4□□□□□ -1.71
LMO4P61968 AC008507.2-201ENST00000588402 1176 ntBASIC4.4□□□□□ -1.71
LMO4P61968 AL158062.1-201ENST00000619632 745 ntBASIC4.4□□□□□ -1.71
LMO4P61968 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.4□□□□□ -1.71
LMO4P61968 uc_338.7-201ENST00000621834 124 ntBASIC4.4□□□□□ -1.71
LMO4P61968 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.4□□□□□ -1.71
LMO4P61968 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.4□□□□□ -1.71
LMO4P61968 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.4□□□□□ -1.71
LMO4P61968 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.4□□□□□ -1.71
LMO4P61968 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC4.4□□□□□ -1.71
LMO4P61968 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC4.4□□□□□ -1.71
LMO4P61968 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
LMO4P61968 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LMO4P61968 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.4□□□□□ -1.71
LMO4P61968 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
LMO4P61968 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.4□□□□□ -1.71
LMO4P61968 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LMO4P61968 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC4.4□□□□□ -1.71
LMO4P61968 AP001002.1-201ENST00000625148 1513 ntBASIC4.4□□□□□ -1.71
LMO4P61968 PANDAR-201ENST00000629595 1506 ntBASIC4.4□□□□□ -1.71
LMO4P61968 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC4.4□□□□□ -1.71
LMO4P61968 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
LMO4P61968 AC079097.1-201ENST00000512187 1399 ntBASIC4.4□□□□□ -1.71
LMO4P61968 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LMO4P61968 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC4.39□□□□□ -1.71
LMO4P61968 AC015799.1-201ENST00000622996 3122 ntBASIC4.39□□□□□ -1.71
LMO4P61968 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LMO4P61968 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LMO4P61968 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LMO4P61968 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC4.39□□□□□ -1.71
LMO4P61968 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LMO4P61968 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LMO4P61968 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LMO4P61968 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LMO4P61968 RNU6-618P-201ENST00000363518 112 ntBASIC4.39□□□□□ -1.71
LMO4P61968 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.39□□□□□ -1.71
LMO4P61968 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LMO4P61968 GCNT6-201ENST00000379591 934 ntBASIC4.39□□□□□ -1.71
LMO4P61968 AL109941.1-201ENST00000401925 229 ntBASIC4.39□□□□□ -1.71
LMO4P61968 NUDT19P3-201ENST00000404698 555 ntBASIC4.39□□□□□ -1.71
LMO4P61968 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.39□□□□□ -1.71
LMO4P61968 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
LMO4P61968 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.39□□□□□ -1.71
LMO4P61968 RNU6-564P-201ENST00000410983 104 ntBASIC4.39□□□□□ -1.71
LMO4P61968 AL445213.1-201ENST00000412589 747 ntBASIC4.39□□□□□ -1.71
LMO4P61968 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.39□□□□□ -1.71
LMO4P61968 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.39□□□□□ -1.71
LMO4P61968 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.39□□□□□ -1.71
LMO4P61968 MRPS21P3-201ENST00000436696 262 ntBASIC4.39□□□□□ -1.71
LMO4P61968 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.39□□□□□ -1.71
LMO4P61968 RPL7P61-201ENST00000451721 751 ntBASIC4.39□□□□□ -1.71
LMO4P61968 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms