Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.61□□□□□ -1.67
CDC42P60953 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CDC42P60953 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.61□□□□□ -1.67
CDC42P60953 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDC42P60953 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.61□□□□□ -1.67
CDC42P60953 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.61□□□□□ -1.67
CDC42P60953 AL359922.3-201ENST00000624779 1670 ntBASIC4.61□□□□□ -1.67
CDC42P60953 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDC42P60953 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.6□□□□□ -1.67
CDC42P60953 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDC42P60953 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDC42P60953 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDC42P60953 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
CDC42P60953 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CDC42P60953 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDC42P60953 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDC42P60953 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CDC42P60953 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDC42P60953 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CDC42P60953 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.6□□□□□ -1.67
CDC42P60953 SNORA79B-201ENST00000410557 148 ntBASIC4.6□□□□□ -1.67
CDC42P60953 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.6□□□□□ -1.67
CDC42P60953 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.6□□□□□ -1.67
CDC42P60953 CKS1BP6-201ENST00000424932 240 ntBASIC4.6□□□□□ -1.67
CDC42P60953 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.6□□□□□ -1.67
CDC42P60953 AC092447.2-201ENST00000435487 669 ntBASIC4.6□□□□□ -1.67
CDC42P60953 TXNP5-201ENST00000441043 315 ntBASIC4.6□□□□□ -1.67
CDC42P60953 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.6□□□□□ -1.67
CDC42P60953 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.6□□□□□ -1.67
CDC42P60953 AC084754.1-201ENST00000463466 464 ntBASIC4.6□□□□□ -1.67
CDC42P60953 AC138866.2-201ENST00000508650 584 ntBASIC4.6□□□□□ -1.67
CDC42P60953 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.6□□□□□ -1.67
CDC42P60953 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDC42P60953 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.6□□□□□ -1.67
CDC42P60953 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDC42P60953 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.6□□□□□ -1.67
CDC42P60953 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.6□□□□□ -1.67
CDC42P60953 AC015720.2-201ENST00000567709 334 ntBASIC4.6□□□□□ -1.67
CDC42P60953 NDUFA5P11-201ENST00000567995 343 ntBASIC4.6□□□□□ -1.67
CDC42P60953 AC010547.6-201ENST00000571789 193 ntBASIC4.6□□□□□ -1.67
CDC42P60953 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.6□□□□□ -1.67
CDC42P60953 AF117829.2-201ENST00000619538 361 ntBASIC4.6□□□□□ -1.67
CDC42P60953 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.6□□□□□ -1.67
CDC42P60953 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CDC42P60953 MTND5P12-201ENST00000502851 1449 ntBASIC4.6□□□□□ -1.67
CDC42P60953 CASC19-206ENST00000641028 1430 ntBASIC4.6□□□□□ -1.67
CDC42P60953 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CDC42P60953 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDC42P60953 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDC42P60953 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CDC42P60953 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDC42P60953 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.6□□□□□ -1.67
CDC42P60953 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDC42P60953 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.6□□□□□ -1.67
CDC42P60953 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDC42P60953 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.59□□□□□ -1.67
CDC42P60953 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.59□□□□□ -1.67
CDC42P60953 SNORA73.1-201ENST00000363107 205 ntBASIC4.59□□□□□ -1.67
CDC42P60953 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDC42P60953 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDC42P60953 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC4.59□□□□□ -1.67
CDC42P60953 RNA5SP284-201ENST00000384547 118 ntBASIC4.59□□□□□ -1.67
CDC42P60953 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDC42P60953 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
CDC42P60953 AL133268.1-201ENST00000405676 1401 ntBASIC4.59□□□□□ -1.67
CDC42P60953 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDC42P60953 RPS3P2-201ENST00000421346 701 ntBASIC4.59□□□□□ -1.67
CDC42P60953 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CDC42P60953 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.59□□□□□ -1.67
CDC42P60953 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.59□□□□□ -1.67
CDC42P60953 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.59□□□□□ -1.67
CDC42P60953 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDC42P60953 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDC42P60953 AC108751.2-201ENST00000469993 231 ntBASIC4.59□□□□□ -1.67
CDC42P60953 AC007998.1-201ENST00000474156 672 ntBASIC4.59□□□□□ -1.67
CDC42P60953 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDC42P60953 RPL7AP10-201ENST00000481016 791 ntBASIC4.59□□□□□ -1.67
CDC42P60953 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC4.59□□□□□ -1.67
CDC42P60953 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.59□□□□□ -1.67
CDC42P60953 RNA5SP373-201ENST00000517271 95 ntBASIC4.59□□□□□ -1.67
CDC42P60953 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.59□□□□□ -1.67
CDC42P60953 DDX18P5-201ENST00000534547 1306 ntBASIC4.59□□□□□ -1.67
CDC42P60953 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.59□□□□□ -1.67
CDC42P60953 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.59□□□□□ -1.67
CDC42P60953 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.59□□□□□ -1.67
CDC42P60953 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.59□□□□□ -1.67
CDC42P60953 AL008729.2-201ENST00000606393 473 ntBASIC4.59□□□□□ -1.67
CDC42P60953 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.59□□□□□ -1.67
CDC42P60953 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.59□□□□□ -1.67
CDC42P60953 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.59□□□□□ -1.67
CDC42P60953 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
CDC42P60953 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
CDC42P60953 AC092435.4-201ENST00000623012 4159 ntBASIC4.59□□□□□ -1.68
CDC42P60953 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CDC42P60953 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
CDC42P60953 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
CDC42P60953 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.58□□□□□ -1.68
CDC42P60953 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDC42P60953 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
CDC42P60953 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms