Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.28□□□□□ -1.56
LIMK2P53671 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.28□□□□□ -1.56
LIMK2P53671 AC005033.1-201ENST00000428904 813 ntBASIC5.28□□□□□ -1.56
LIMK2P53671 FAM96AP1-201ENST00000430879 482 ntBASIC5.28□□□□□ -1.56
LIMK2P53671 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.28□□□□□ -1.56
LIMK2P53671 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
LIMK2P53671 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.28□□□□□ -1.56
LIMK2P53671 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.28□□□□□ -1.56
LIMK2P53671 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.28□□□□□ -1.56
LIMK2P53671 COX6B1P2-201ENST00000489624 230 ntBASIC5.28□□□□□ -1.56
LIMK2P53671 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
LIMK2P53671 AC231760.1-201ENST00000498002 260 ntBASIC5.28□□□□□ -1.56
LIMK2P53671 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.28□□□□□ -1.56
LIMK2P53671 NDUFA5P12-201ENST00000503796 343 ntBASIC5.28□□□□□ -1.56
LIMK2P53671 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.28□□□□□ -1.56
LIMK2P53671 AC147055.3-201ENST00000510547 851 ntBASIC5.28□□□□□ -1.56
LIMK2P53671 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.28□□□□□ -1.56
LIMK2P53671 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
LIMK2P53671 AC020937.1-201ENST00000519677 1013 ntBASIC5.28□□□□□ -1.56
LIMK2P53671 AC022832.1-201ENST00000530718 645 ntBASIC5.28□□□□□ -1.56
LIMK2P53671 YWHABP2-201ENST00000540201 713 ntBASIC5.28□□□□□ -1.56
LIMK2P53671 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.28□□□□□ -1.56
LIMK2P53671 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.28□□□□□ -1.56
LIMK2P53671 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LIMK2P53671 AC005252.1-201ENST00000604518 1063 ntBASIC5.28□□□□□ -1.56
LIMK2P53671 AC009597.2-201ENST00000604659 592 ntBASIC5.28□□□□□ -1.56
LIMK2P53671 AL162431.4-201ENST00000604674 411 ntBASIC5.28□□□□□ -1.56
LIMK2P53671 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.28□□□□□ -1.56
LIMK2P53671 OR51C1P-201ENST00000608504 942 ntBASIC5.28□□□□□ -1.56
LIMK2P53671 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LIMK2P53671 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LIMK2P53671 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.28□□□□□ -1.56
LIMK2P53671 ZNF733P-202ENST00000444809 1573 ntBASIC5.28□□□□□ -1.56
LIMK2P53671 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.28□□□□□ -1.56
LIMK2P53671 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
LIMK2P53671 AL031595.2-201ENST00000624215 19071 ntBASIC5.28□□□□□ -1.56
LIMK2P53671 TCP11X1-202ENST00000622971 1372 ntBASIC5.28□□□□□ -1.56
LIMK2P53671 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LIMK2P53671 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LIMK2P53671 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
LIMK2P53671 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LIMK2P53671 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
LIMK2P53671 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
LIMK2P53671 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LIMK2P53671 PROS2P-201ENST00000474651 1951 ntBASIC5.27□□□□□ -1.57
LIMK2P53671 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LIMK2P53671 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
LIMK2P53671 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
LIMK2P53671 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.27□□□□□ -1.57
LIMK2P53671 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
LIMK2P53671 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
LIMK2P53671 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LIMK2P53671 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.27□□□□□ -1.57
LIMK2P53671 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LIMK2P53671 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
LIMK2P53671 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
LIMK2P53671 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.27□□□□□ -1.57
LIMK2P53671 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.27□□□□□ -1.57
LIMK2P53671 SNORA67-201ENST00000384423 137 ntBASIC5.27□□□□□ -1.57
LIMK2P53671 AL133388.1-201ENST00000404509 287 ntBASIC5.27□□□□□ -1.57
LIMK2P53671 RNA5SP487-201ENST00000410186 122 ntBASIC5.27□□□□□ -1.57
LIMK2P53671 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.27□□□□□ -1.57
LIMK2P53671 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
LIMK2P53671 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.27□□□□□ -1.57
LIMK2P53671 AC108075.1-201ENST00000424692 529 ntBASIC5.27□□□□□ -1.57
LIMK2P53671 AC006455.6-201ENST00000426192 893 ntBASIC5.27□□□□□ -1.57
LIMK2P53671 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.27□□□□□ -1.57
LIMK2P53671 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.27□□□□□ -1.57
LIMK2P53671 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.27□□□□□ -1.57
LIMK2P53671 AC004453.1-201ENST00000487895 408 ntBASIC5.27□□□□□ -1.57
LIMK2P53671 HMGB1P40-201ENST00000525121 540 ntBASIC5.27□□□□□ -1.57
LIMK2P53671 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.27□□□□□ -1.57
LIMK2P53671 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.27□□□□□ -1.57
LIMK2P53671 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.27□□□□□ -1.57
LIMK2P53671 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
LIMK2P53671 MTATP6P25-201ENST00000574491 261 ntBASIC5.27□□□□□ -1.57
LIMK2P53671 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.27□□□□□ -1.57
LIMK2P53671 RN7SL708P-201ENST00000580952 299 ntBASIC5.27□□□□□ -1.57
LIMK2P53671 AC004948.1-201ENST00000609858 672 ntBASIC5.27□□□□□ -1.57
LIMK2P53671 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.27□□□□□ -1.57
LIMK2P53671 AC074101.1-201ENST00000637861 241 ntBASIC5.27□□□□□ -1.57
LIMK2P53671 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
LIMK2P53671 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LIMK2P53671 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LIMK2P53671 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LIMK2P53671 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LIMK2P53671 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LIMK2P53671 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LIMK2P53671 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LIMK2P53671 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
LIMK2P53671 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LIMK2P53671 AC092111.2-201ENST00000611627 1414 ntBASIC5.26□□□□□ -1.57
LIMK2P53671 U8.4-201ENST00000363626 134 ntBASIC5.26□□□□□ -1.57
LIMK2P53671 MIR765-201ENST00000390226 114 ntBASIC5.26□□□□□ -1.57
LIMK2P53671 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.26□□□□□ -1.57
LIMK2P53671 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.26□□□□□ -1.57
LIMK2P53671 RN7SKP213-201ENST00000410746 298 ntBASIC5.26□□□□□ -1.57
LIMK2P53671 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.26□□□□□ -1.57
LIMK2P53671 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.26□□□□□ -1.57
LIMK2P53671 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms