Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 OR3A2-201ENST00000408891 1076 ntBASIC6.72□□□□□ -1.33
MRE11P49959 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.72□□□□□ -1.33
MRE11P49959 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC6.72□□□□□ -1.33
MRE11P49959 DPPA2P2-201ENST00000418220 897 ntBASIC6.72□□□□□ -1.33
MRE11P49959 RNGTTP1-201ENST00000420965 728 ntBASIC6.72□□□□□ -1.33
MRE11P49959 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.72□□□□□ -1.33
MRE11P49959 RPL7P34-201ENST00000433316 712 ntBASIC6.72□□□□□ -1.33
MRE11P49959 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
MRE11P49959 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.72□□□□□ -1.33
MRE11P49959 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.72□□□□□ -1.33
MRE11P49959 CYCSP51-201ENST00000443545 318 ntBASIC6.72□□□□□ -1.33
MRE11P49959 TXNP2-201ENST00000443918 295 ntBASIC6.72□□□□□ -1.33
MRE11P49959 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.72□□□□□ -1.33
MRE11P49959 OTX2P1-201ENST00000450956 354 ntBASIC6.72□□□□□ -1.33
MRE11P49959 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.72□□□□□ -1.33
MRE11P49959 ACA64.1-201ENST00000459171 127 ntBASIC6.72□□□□□ -1.33
MRE11P49959 ABCC13-202ENST00000463099 3842 ntBASIC6.72□□□□□ -1.33
MRE11P49959 RPL32P14-201ENST00000463196 378 ntBASIC6.72□□□□□ -1.33
MRE11P49959 RN7SL643P-201ENST00000471845 291 ntBASIC6.72□□□□□ -1.33
MRE11P49959 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC6.72□□□□□ -1.33
MRE11P49959 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
MRE11P49959 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC6.72□□□□□ -1.33
MRE11P49959 ENPP7P11-201ENST00000505915 627 ntBASIC6.72□□□□□ -1.33
MRE11P49959 AC069306.1-201ENST00000507006 843 ntBASIC6.72□□□□□ -1.33
MRE11P49959 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.72□□□□□ -1.33
MRE11P49959 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC6.72□□□□□ -1.33
MRE11P49959 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.72□□□□□ -1.33
MRE11P49959 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC6.72□□□□□ -1.33
MRE11P49959 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.72□□□□□ -1.33
MRE11P49959 RNU6-889P-201ENST00000517189 103 ntBASIC6.72□□□□□ -1.33
MRE11P49959 IGKV3D-25-201ENST00000519599 235 ntBASIC6.72□□□□□ -1.33
MRE11P49959 AC010376.1-201ENST00000522101 334 ntBASIC6.72□□□□□ -1.33
MRE11P49959 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.72□□□□□ -1.33
MRE11P49959 AC118942.1-201ENST00000529674 1035 ntBASIC6.72□□□□□ -1.33
MRE11P49959 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC6.72□□□□□ -1.33
MRE11P49959 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.72□□□□□ -1.33
MRE11P49959 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.72□□□□□ -1.33
MRE11P49959 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.72□□□□□ -1.33
MRE11P49959 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.72□□□□□ -1.33
MRE11P49959 AL132857.1-201ENST00000555180 708 ntBASIC6.72□□□□□ -1.33
MRE11P49959 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC6.72□□□□□ -1.33
MRE11P49959 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.72□□□□□ -1.33
MRE11P49959 AC092718.4-201ENST00000566639 716 ntBASIC6.72□□□□□ -1.33
MRE11P49959 AC005951.1-201ENST00000576706 485 ntBASIC6.72□□□□□ -1.33
MRE11P49959 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.72□□□□□ -1.33
MRE11P49959 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.72□□□□□ -1.33
MRE11P49959 AC026898.1-201ENST00000586404 571 ntBASIC6.72□□□□□ -1.33
MRE11P49959 AC245036.5-201ENST00000596330 847 ntBASIC6.72□□□□□ -1.33
MRE11P49959 AC080013.6-201ENST00000606185 215 ntBASIC6.72□□□□□ -1.33
MRE11P49959 AL591167.1-201ENST00000607321 456 ntBASIC6.72□□□□□ -1.33
MRE11P49959 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.72□□□□□ -1.33
MRE11P49959 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.72□□□□□ -1.33
MRE11P49959 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC6.72□□□□□ -1.33
MRE11P49959 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC6.72□□□□□ -1.33
MRE11P49959 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.72□□□□□ -1.33
MRE11P49959 AC017104.5-201ENST00000637647 639 ntBASIC6.72□□□□□ -1.33
MRE11P49959 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.72□□□□□ -1.33
MRE11P49959 AC005702.3-201ENST00000585345 1447 ntBASIC6.72□□□□□ -1.33
MRE11P49959 AC073136.1-201ENST00000449426 2884 ntBASIC6.72□□□□□ -1.33
MRE11P49959 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
MRE11P49959 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.72□□□□□ -1.33
MRE11P49959 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
MRE11P49959 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
MRE11P49959 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.72□□□□□ -1.33
MRE11P49959 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
MRE11P49959 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
MRE11P49959 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
MRE11P49959 AL137141.1-201ENST00000624622 4836 ntBASIC6.71□□□□□ -1.33
MRE11P49959 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
MRE11P49959 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
MRE11P49959 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
MRE11P49959 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
MRE11P49959 AC103591.2-201ENST00000265259 766 ntBASIC6.71□□□□□ -1.34
MRE11P49959 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
MRE11P49959 RNU1-84P-201ENST00000365447 164 ntBASIC6.71□□□□□ -1.34
MRE11P49959 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
MRE11P49959 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC6.71□□□□□ -1.34
MRE11P49959 SNORA51.9-201ENST00000384295 124 ntBASIC6.71□□□□□ -1.34
MRE11P49959 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.71□□□□□ -1.34
MRE11P49959 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.71□□□□□ -1.34
MRE11P49959 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.71□□□□□ -1.34
MRE11P49959 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
MRE11P49959 PPIAP10-201ENST00000438675 458 ntBASIC6.71□□□□□ -1.34
MRE11P49959 ATP5LP2-201ENST00000440646 311 ntBASIC6.71□□□□□ -1.34
MRE11P49959 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC6.71□□□□□ -1.34
MRE11P49959 CXCR2P1-202ENST00000443392 1074 ntBASIC6.71□□□□□ -1.34
MRE11P49959 AC006326.1-201ENST00000445465 787 ntBASIC6.71□□□□□ -1.34
MRE11P49959 AL096829.2-201ENST00000446582 742 ntBASIC6.71□□□□□ -1.34
MRE11P49959 EXOSC3P1-201ENST00000448649 500 ntBASIC6.71□□□□□ -1.34
MRE11P49959 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC6.71□□□□□ -1.34
MRE11P49959 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.71□□□□□ -1.34
MRE11P49959 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.71□□□□□ -1.34
MRE11P49959 RN7SL326P-201ENST00000477493 296 ntBASIC6.71□□□□□ -1.34
MRE11P49959 AC012123.2-201ENST00000485809 248 ntBASIC6.71□□□□□ -1.34
MRE11P49959 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC6.71□□□□□ -1.34
MRE11P49959 AC023424.1-201ENST00000496058 459 ntBASIC6.71□□□□□ -1.34
MRE11P49959 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC6.71□□□□□ -1.34
MRE11P49959 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.71□□□□□ -1.34
MRE11P49959 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
MRE11P49959 FTH1P11-201ENST00000517577 551 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms