Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CASP4P49662 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.5□□□□□ -1.53
CASP4P49662 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CASP4P49662 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CASP4P49662 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CASP4P49662 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.5□□□□□ -1.53
CASP4P49662 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.5□□□□□ -1.53
CASP4P49662 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CASP4P49662 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.5□□□□□ -1.53
CASP4P49662 RNA5SP455-201ENST00000365190 119 ntBASIC5.5□□□□□ -1.53
CASP4P49662 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CASP4P49662 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CASP4P49662 RN7SKP278-201ENST00000410504 342 ntBASIC5.5□□□□□ -1.53
CASP4P49662 AL445213.1-201ENST00000412589 747 ntBASIC5.5□□□□□ -1.53
CASP4P49662 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.5□□□□□ -1.53
CASP4P49662 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.5□□□□□ -1.53
CASP4P49662 KNOP1P3-201ENST00000446933 426 ntBASIC5.5□□□□□ -1.53
CASP4P49662 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CASP4P49662 HMGB1P4-201ENST00000455362 567 ntBASIC5.5□□□□□ -1.53
CASP4P49662 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.5□□□□□ -1.53
CASP4P49662 RPS17P2-201ENST00000461663 408 ntBASIC5.5□□□□□ -1.53
CASP4P49662 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CASP4P49662 HMGN2P25-201ENST00000486956 268 ntBASIC5.5□□□□□ -1.53
CASP4P49662 RN7SL808P-201ENST00000496066 299 ntBASIC5.5□□□□□ -1.53
CASP4P49662 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.5□□□□□ -1.53
CASP4P49662 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
CASP4P49662 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CASP4P49662 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.5□□□□□ -1.53
CASP4P49662 HAUS8P1-201ENST00000549005 542 ntBASIC5.5□□□□□ -1.53
CASP4P49662 AL512310.9-201ENST00000553311 948 ntBASIC5.5□□□□□ -1.53
CASP4P49662 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.5□□□□□ -1.53
CASP4P49662 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.5□□□□□ -1.53
CASP4P49662 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.5□□□□□ -1.53
CASP4P49662 AL445222.1-201ENST00000607259 628 ntBASIC5.5□□□□□ -1.53
CASP4P49662 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.5□□□□□ -1.53
CASP4P49662 AC244517.3-201ENST00000616254 1235 ntBASIC5.5□□□□□ -1.53
CASP4P49662 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.5□□□□□ -1.53
CASP4P49662 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.5□□□□□ -1.53
CASP4P49662 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CASP4P49662 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CASP4P49662 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.5□□□□□ -1.53
CASP4P49662 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CASP4P49662 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CASP4P49662 ZNF733P-202ENST00000444809 1573 ntBASIC5.5□□□□□ -1.53
CASP4P49662 AC011447.7-201ENST00000624228 1590 ntBASIC5.5□□□□□ -1.53
CASP4P49662 AC100778.3-201ENST00000580060 1750 ntBASIC5.5□□□□□ -1.53
CASP4P49662 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CASP4P49662 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CASP4P49662 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.49□□□□□ -1.53
CASP4P49662 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CASP4P49662 ATP5HP3-201ENST00000396994 486 ntBASIC5.49□□□□□ -1.53
CASP4P49662 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.49□□□□□ -1.53
CASP4P49662 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.49□□□□□ -1.53
CASP4P49662 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.49□□□□□ -1.53
CASP4P49662 AC004980.3-201ENST00000447046 365 ntBASIC5.49□□□□□ -1.53
CASP4P49662 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.49□□□□□ -1.53
CASP4P49662 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.49□□□□□ -1.53
CASP4P49662 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.49□□□□□ -1.53
CASP4P49662 IGLV2-28-201ENST00000520681 304 ntBASIC5.49□□□□□ -1.53
CASP4P49662 AC138832.1-201ENST00000522871 556 ntBASIC5.49□□□□□ -1.53
CASP4P49662 AC022832.1-201ENST00000530718 645 ntBASIC5.49□□□□□ -1.53
CASP4P49662 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.49□□□□□ -1.53
CASP4P49662 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.49□□□□□ -1.53
CASP4P49662 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.49□□□□□ -1.53
CASP4P49662 AC011447.4-201ENST00000587562 111 ntBASIC5.49□□□□□ -1.53
CASP4P49662 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.49□□□□□ -1.53
CASP4P49662 AC016769.4-201ENST00000616893 535 ntBASIC5.49□□□□□ -1.53
CASP4P49662 BX005214.3-202ENST00000619809 325 ntBASIC5.49□□□□□ -1.53
CASP4P49662 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CASP4P49662 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.49□□□□□ -1.53
CASP4P49662 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.49□□□□□ -1.53
CASP4P49662 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CASP4P49662 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.49□□□□□ -1.53
CASP4P49662 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.49□□□□□ -1.53
CASP4P49662 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CASP4P49662 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CASP4P49662 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CASP4P49662 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
CASP4P49662 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.48□□□□□ -1.53
CASP4P49662 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CASP4P49662 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CASP4P49662 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CASP4P49662 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CASP4P49662 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.48□□□□□ -1.53
CASP4P49662 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.48□□□□□ -1.53
CASP4P49662 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.48□□□□□ -1.53
CASP4P49662 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CASP4P49662 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.48□□□□□ -1.53
CASP4P49662 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CASP4P49662 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CASP4P49662 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CASP4P49662 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CASP4P49662 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CASP4P49662 NXF4-202ENST00000416098 1465 ntBASIC5.48□□□□□ -1.53
CASP4P49662 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.48□□□□□ -1.53
CASP4P49662 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CASP4P49662 SNORA70.10-201ENST00000384515 134 ntBASIC5.48□□□□□ -1.53
CASP4P49662 LRRC37BP1-201ENST00000398851 714 ntBASIC5.48□□□□□ -1.53
CASP4P49662 BMS1P13-201ENST00000417301 885 ntBASIC5.48□□□□□ -1.53
CASP4P49662 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms