Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 RN7SL443P-201ENST00000464331 290 ntBASIC5.45□□□□□ -1.54
BRCC3P46736 RPL7P16-201ENST00000479738 738 ntBASIC5.45□□□□□ -1.54
BRCC3P46736 AC140172.1-201ENST00000502928 141 ntBASIC5.45□□□□□ -1.54
BRCC3P46736 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.45□□□□□ -1.54
BRCC3P46736 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.45□□□□□ -1.54
BRCC3P46736 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.45□□□□□ -1.54
BRCC3P46736 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.45□□□□□ -1.54
BRCC3P46736 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.45□□□□□ -1.54
BRCC3P46736 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.45□□□□□ -1.54
BRCC3P46736 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
BRCC3P46736 AC011487.3-201ENST00000593607 453 ntBASIC5.45□□□□□ -1.54
BRCC3P46736 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.45□□□□□ -1.54
BRCC3P46736 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
BRCC3P46736 SYT14P1-202ENST00000600441 1448 ntBASIC5.45□□□□□ -1.54
BRCC3P46736 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
BRCC3P46736 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.45□□□□□ -1.54
BRCC3P46736 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.45□□□□□ -1.54
BRCC3P46736 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
BRCC3P46736 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
BRCC3P46736 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.44□□□□□ -1.54
BRCC3P46736 AC006210.2-201ENST00000367074 1545 ntBASIC5.44□□□□□ -1.54
BRCC3P46736 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.44□□□□□ -1.54
BRCC3P46736 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
BRCC3P46736 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
BRCC3P46736 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
BRCC3P46736 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.44□□□□□ -1.54
BRCC3P46736 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
BRCC3P46736 RNU6-167P-201ENST00000384292 106 ntBASIC5.44□□□□□ -1.54
BRCC3P46736 AL050305.1-201ENST00000399993 1230 ntBASIC5.44□□□□□ -1.54
BRCC3P46736 RPL37P18-201ENST00000411602 243 ntBASIC5.44□□□□□ -1.54
BRCC3P46736 COX6B1P1-201ENST00000415962 213 ntBASIC5.44□□□□□ -1.54
BRCC3P46736 AL158827.1-201ENST00000416300 391 ntBASIC5.44□□□□□ -1.54
BRCC3P46736 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.44□□□□□ -1.54
BRCC3P46736 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
BRCC3P46736 MGAT2P2-201ENST00000427194 797 ntBASIC5.44□□□□□ -1.54
BRCC3P46736 BX119904.3-201ENST00000428194 957 ntBASIC5.44□□□□□ -1.54
BRCC3P46736 OR6C71P-201ENST00000432580 913 ntBASIC5.44□□□□□ -1.54
BRCC3P46736 MTND2P40-201ENST00000436718 841 ntBASIC5.44□□□□□ -1.54
BRCC3P46736 IGHV5-78-201ENST00000450948 295 ntBASIC5.44□□□□□ -1.54
BRCC3P46736 RPL5P16-201ENST00000471467 790 ntBASIC5.44□□□□□ -1.54
BRCC3P46736 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.44□□□□□ -1.54
BRCC3P46736 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.44□□□□□ -1.54
BRCC3P46736 AC022616.2-201ENST00000523185 300 ntBASIC5.44□□□□□ -1.54
BRCC3P46736 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.44□□□□□ -1.54
BRCC3P46736 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.44□□□□□ -1.54
BRCC3P46736 AC021006.3-201ENST00000530771 192 ntBASIC5.44□□□□□ -1.54
BRCC3P46736 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.44□□□□□ -1.54
BRCC3P46736 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.44□□□□□ -1.54
BRCC3P46736 AC019322.1-201ENST00000571869 389 ntBASIC5.44□□□□□ -1.54
BRCC3P46736 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.44□□□□□ -1.54
BRCC3P46736 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.44□□□□□ -1.54
BRCC3P46736 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.44□□□□□ -1.54
BRCC3P46736 AC073575.2-201ENST00000614212 627 ntBASIC5.44□□□□□ -1.54
BRCC3P46736 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
BRCC3P46736 AL356752.1-201ENST00000615844 593 ntBASIC5.44□□□□□ -1.54
BRCC3P46736 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
BRCC3P46736 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
BRCC3P46736 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.44□□□□□ -1.54
BRCC3P46736 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
BRCC3P46736 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
BRCC3P46736 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
BRCC3P46736 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
BRCC3P46736 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
BRCC3P46736 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.44□□□□□ -1.54
BRCC3P46736 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
BRCC3P46736 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
BRCC3P46736 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
BRCC3P46736 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRCC3P46736 AC125336.1-201ENST00000508893 2827 ntBASIC5.43□□□□□ -1.54
BRCC3P46736 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.43□□□□□ -1.54
BRCC3P46736 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRCC3P46736 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRCC3P46736 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRCC3P46736 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
BRCC3P46736 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.43□□□□□ -1.54
BRCC3P46736 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRCC3P46736 AL450345.1-202ENST00000605741 3881 ntBASIC5.43□□□□□ -1.54
BRCC3P46736 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
BRCC3P46736 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
BRCC3P46736 OR1L6-202ENST00000373684 1044 ntBASIC5.43□□□□□ -1.54
BRCC3P46736 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
BRCC3P46736 AL035419.1-201ENST00000397037 564 ntBASIC5.43□□□□□ -1.54
BRCC3P46736 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.43□□□□□ -1.54
BRCC3P46736 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.43□□□□□ -1.54
BRCC3P46736 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.43□□□□□ -1.54
BRCC3P46736 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.43□□□□□ -1.54
BRCC3P46736 NPM1P48-201ENST00000436002 853 ntBASIC5.43□□□□□ -1.54
BRCC3P46736 TCEA1P1-201ENST00000449716 880 ntBASIC5.43□□□□□ -1.54
BRCC3P46736 DEFB109A-201ENST00000482450 265 ntBASIC5.43□□□□□ -1.54
BRCC3P46736 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.43□□□□□ -1.54
BRCC3P46736 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.43□□□□□ -1.54
BRCC3P46736 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.43□□□□□ -1.54
BRCC3P46736 MRPS33P2-201ENST00000507850 322 ntBASIC5.43□□□□□ -1.54
BRCC3P46736 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.43□□□□□ -1.54
BRCC3P46736 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.43□□□□□ -1.54
BRCC3P46736 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRCC3P46736 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.43□□□□□ -1.54
BRCC3P46736 PCNPP1-201ENST00000552501 511 ntBASIC5.43□□□□□ -1.54
BRCC3P46736 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.43□□□□□ -1.54
BRCC3P46736 AC009117.1-201ENST00000563948 554 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms