Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXD13P35453 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXD13P35453 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXD13P35453 AC005294.1-201ENST00000355509 281 ntBASIC5.78□□□□□ -1.48
HOXD13P35453 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXD13P35453 RNU1-19P-201ENST00000363306 165 ntBASIC5.78□□□□□ -1.48
HOXD13P35453 RNA5SP435-201ENST00000364044 108 ntBASIC5.78□□□□□ -1.48
HOXD13P35453 MT-TP-201ENST00000387461 68 ntBASIC5.78□□□□□ -1.48
HOXD13P35453 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HOXD13P35453 SNORA48.4-201ENST00000391089 134 ntBASIC5.78□□□□□ -1.48
HOXD13P35453 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXD13P35453 RPL26P37-201ENST00000411983 438 ntBASIC5.78□□□□□ -1.48
HOXD13P35453 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXD13P35453 RPL12P9-201ENST00000412942 488 ntBASIC5.78□□□□□ -1.48
HOXD13P35453 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXD13P35453 AC006065.1-201ENST00000422539 802 ntBASIC5.78□□□□□ -1.48
HOXD13P35453 MGAT2P2-201ENST00000427194 797 ntBASIC5.78□□□□□ -1.48
HOXD13P35453 VTI1BP4-201ENST00000427516 527 ntBASIC5.78□□□□□ -1.48
HOXD13P35453 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXD13P35453 CLUHP1-201ENST00000435012 1190 ntBASIC5.78□□□□□ -1.48
HOXD13P35453 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXD13P35453 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXD13P35453 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXD13P35453 RPL5P25-201ENST00000441148 775 ntBASIC5.78□□□□□ -1.48
HOXD13P35453 AL353898.1-201ENST00000444055 238 ntBASIC5.78□□□□□ -1.48
HOXD13P35453 RPS26P39-201ENST00000469206 341 ntBASIC5.78□□□□□ -1.48
HOXD13P35453 OR9N1P-202ENST00000494289 481 ntBASIC5.78□□□□□ -1.48
HOXD13P35453 RPS24P16-201ENST00000497294 392 ntBASIC5.78□□□□□ -1.48
HOXD13P35453 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.78□□□□□ -1.48
HOXD13P35453 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXD13P35453 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXD13P35453 COL6A4P2-205ENST00000509855 506 ntBASIC5.78□□□□□ -1.48
HOXD13P35453 AC026688.1-201ENST00000520639 1168 ntBASIC5.78□□□□□ -1.48
HOXD13P35453 AC022360.1-201ENST00000521058 340 ntBASIC5.78□□□□□ -1.48
HOXD13P35453 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HOXD13P35453 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXD13P35453 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXD13P35453 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
HOXD13P35453 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HOXD13P35453 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HOXD13P35453 AC069307.1-201ENST00000602820 447 ntBASIC5.78□□□□□ -1.48
HOXD13P35453 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXD13P35453 AC022467.1-201ENST00000614738 749 ntBASIC5.78□□□□□ -1.48
HOXD13P35453 RBPJP2-201ENST00000618187 1444 ntBASIC5.78□□□□□ -1.48
HOXD13P35453 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXD13P35453 MIR4302-201ENST00000638058 60 ntBASIC5.78□□□□□ -1.48
HOXD13P35453 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HOXD13P35453 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HOXD13P35453 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HOXD13P35453 CASC19-264ENST00000641912 1184 ntBASIC5.78□□□□□ -1.48
HOXD13P35453 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
HOXD13P35453 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.48
HOXD13P35453 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXD13P35453 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXD13P35453 MRRFP1-201ENST00000435941 1675 ntBASIC5.78□□□□□ -1.48
HOXD13P35453 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXD13P35453 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.78□□□□□ -1.48
HOXD13P35453 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
HOXD13P35453 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXD13P35453 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXD13P35453 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXD13P35453 Z95114.1-201ENST00000624264 14574 ntBASIC5.77□□□□□ -1.49
HOXD13P35453 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXD13P35453 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXD13P35453 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXD13P35453 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXD13P35453 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
HOXD13P35453 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXD13P35453 RPL5P19-201ENST00000404228 893 ntBASIC5.77□□□□□ -1.49
HOXD13P35453 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXD13P35453 FAR1P1-201ENST00000427163 934 ntBASIC5.77□□□□□ -1.49
HOXD13P35453 MTND2P21-201ENST00000436242 1042 ntBASIC5.77□□□□□ -1.49
HOXD13P35453 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXD13P35453 RPS15AP29-201ENST00000445539 400 ntBASIC5.77□□□□□ -1.49
HOXD13P35453 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.77□□□□□ -1.49
HOXD13P35453 PPIAP20-201ENST00000449839 135 ntBASIC5.77□□□□□ -1.49
HOXD13P35453 HMGB1P3-201ENST00000502802 616 ntBASIC5.77□□□□□ -1.49
HOXD13P35453 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXD13P35453 BTG4P1-201ENST00000510421 183 ntBASIC5.77□□□□□ -1.49
HOXD13P35453 EIF3KP3-201ENST00000514461 639 ntBASIC5.77□□□□□ -1.49
HOXD13P35453 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXD13P35453 OR4A46P-201ENST00000527255 933 ntBASIC5.77□□□□□ -1.49
HOXD13P35453 OR8X1P-201ENST00000534542 869 ntBASIC5.77□□□□□ -1.49
HOXD13P35453 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.77□□□□□ -1.49
HOXD13P35453 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.77□□□□□ -1.49
HOXD13P35453 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.77□□□□□ -1.49
HOXD13P35453 MIR4489-201ENST00000578869 62 ntBASIC5.77□□□□□ -1.49
HOXD13P35453 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXD13P35453 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXD13P35453 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXD13P35453 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXD13P35453 MIR6886-201ENST00000619864 61 ntBASIC5.77□□□□□ -1.49
HOXD13P35453 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXD13P35453 AC006840.1-201ENST00000623069 542 ntBASIC5.77□□□□□ -1.49
HOXD13P35453 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXD13P35453 AL163152.1-201ENST00000642001 374 ntBASIC5.77□□□□□ -1.49
HOXD13P35453 AC006210.2-201ENST00000367074 1545 ntBASIC5.77□□□□□ -1.49
HOXD13P35453 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXD13P35453 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
HOXD13P35453 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms