Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RNA5SP305-201ENST00000362665 119 ntBASIC5.05□□□□□ -1.6
RORAP35398 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RORAP35398 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.05□□□□□ -1.6
RORAP35398 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.05□□□□□ -1.6
RORAP35398 RPS27P18-201ENST00000431701 247 ntBASIC5.05□□□□□ -1.6
RORAP35398 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.05□□□□□ -1.6
RORAP35398 NDUFB4P8-201ENST00000435351 367 ntBASIC5.05□□□□□ -1.6
RORAP35398 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.05□□□□□ -1.6
RORAP35398 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.05□□□□□ -1.6
RORAP35398 TCEA1P3-201ENST00000443005 880 ntBASIC5.05□□□□□ -1.6
RORAP35398 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.05□□□□□ -1.6
RORAP35398 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.05□□□□□ -1.6
RORAP35398 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.05□□□□□ -1.6
RORAP35398 CBX1P5-201ENST00000475330 559 ntBASIC5.05□□□□□ -1.6
RORAP35398 AGGF1P3-201ENST00000493675 1213 ntBASIC5.05□□□□□ -1.6
RORAP35398 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.05□□□□□ -1.6
RORAP35398 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.05□□□□□ -1.6
RORAP35398 AC079064.1-201ENST00000528365 362 ntBASIC5.05□□□□□ -1.6
RORAP35398 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.05□□□□□ -1.6
RORAP35398 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.05□□□□□ -1.6
RORAP35398 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.05□□□□□ -1.6
RORAP35398 MIR4675-201ENST00000577898 77 ntBASIC5.05□□□□□ -1.6
RORAP35398 MIR4472-2-201ENST00000582069 67 ntBASIC5.05□□□□□ -1.6
RORAP35398 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.05□□□□□ -1.6
RORAP35398 AC009163.6-201ENST00000612367 342 ntBASIC5.05□□□□□ -1.6
RORAP35398 AL158062.1-201ENST00000619632 745 ntBASIC5.05□□□□□ -1.6
RORAP35398 AC053481.2-202ENST00000582394 1500 ntBASIC5.05□□□□□ -1.6
RORAP35398 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
RORAP35398 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RORAP35398 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RORAP35398 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
RORAP35398 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RORAP35398 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RORAP35398 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.04□□□□□ -1.6
RORAP35398 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
RORAP35398 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RORAP35398 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RORAP35398 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.04□□□□□ -1.6
RORAP35398 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RORAP35398 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RORAP35398 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.04□□□□□ -1.6
RORAP35398 PPIAP9-201ENST00000403866 498 ntBASIC5.04□□□□□ -1.6
RORAP35398 SNORA81-201ENST00000408493 178 ntBASIC5.04□□□□□ -1.6
RORAP35398 RNA5SP296-201ENST00000410523 111 ntBASIC5.04□□□□□ -1.6
RORAP35398 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.04□□□□□ -1.6
RORAP35398 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.04□□□□□ -1.6
RORAP35398 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.04□□□□□ -1.6
RORAP35398 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.04□□□□□ -1.6
RORAP35398 CEACAMP7-201ENST00000444105 496 ntBASIC5.04□□□□□ -1.6
RORAP35398 AC104634.1-201ENST00000452720 462 ntBASIC5.04□□□□□ -1.6
RORAP35398 Z92846.1-201ENST00000456203 268 ntBASIC5.04□□□□□ -1.6
RORAP35398 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RORAP35398 AC058823.1-201ENST00000485315 474 ntBASIC5.04□□□□□ -1.6
RORAP35398 RN7SL423P-201ENST00000486202 304 ntBASIC5.04□□□□□ -1.6
RORAP35398 AC109462.1-201ENST00000491087 368 ntBASIC5.04□□□□□ -1.6
RORAP35398 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.04□□□□□ -1.6
RORAP35398 SCARNA20.4-201ENST00000516969 131 ntBASIC5.04□□□□□ -1.6
RORAP35398 AP002981.1-201ENST00000517692 975 ntBASIC5.04□□□□□ -1.6
RORAP35398 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.04□□□□□ -1.6
RORAP35398 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.04□□□□□ -1.6
RORAP35398 AC024940.3-201ENST00000538551 316 ntBASIC5.04□□□□□ -1.6
RORAP35398 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.04□□□□□ -1.6
RORAP35398 MTND2P17-201ENST00000550281 688 ntBASIC5.04□□□□□ -1.6
RORAP35398 AL390334.1-201ENST00000556395 450 ntBASIC5.04□□□□□ -1.6
RORAP35398 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.04□□□□□ -1.6
RORAP35398 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.04□□□□□ -1.6
RORAP35398 AC004948.1-201ENST00000609858 672 ntBASIC5.04□□□□□ -1.6
RORAP35398 AC007786.3-201ENST00000615154 596 ntBASIC5.04□□□□□ -1.6
RORAP35398 MIR6133-201ENST00000617057 108 ntBASIC5.04□□□□□ -1.6
RORAP35398 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.04□□□□□ -1.6
RORAP35398 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
RORAP35398 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
RORAP35398 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.04□□□□□ -1.6
RORAP35398 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RORAP35398 AL034549.2-201ENST00000618285 3373 ntBASIC5.04□□□□□ -1.6
RORAP35398 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RORAP35398 AC083843.2-201ENST00000568248 6253 ntBASIC5.04□□□□□ -1.6
RORAP35398 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RORAP35398 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RORAP35398 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.04□□□□□ -1.6
RORAP35398 AC100757.1-201ENST00000616872 1835 ntBASIC5.04□□□□□ -1.6
RORAP35398 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
RORAP35398 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RORAP35398 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.04□□□□□ -1.6
RORAP35398 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
RORAP35398 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RORAP35398 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RORAP35398 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RORAP35398 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RORAP35398 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RORAP35398 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.03□□□□□ -1.6
RORAP35398 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.03□□□□□ -1.6
RORAP35398 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RORAP35398 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RORAP35398 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RORAP35398 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RORAP35398 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.03□□□□□ -1.6
RORAP35398 AL672167.2-201ENST00000377164 879 ntBASIC5.03□□□□□ -1.6
RORAP35398 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RORAP35398 AL589994.1-201ENST00000404962 340 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms