Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CTNNA1P35221 RNA5SP46-201ENST00000362370 120 ntBASIC5.61□□□□□ -1.51
CTNNA1P35221 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CTNNA1P35221 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CTNNA1P35221 RNU6-225P-201ENST00000384613 103 ntBASIC5.61□□□□□ -1.51
CTNNA1P35221 NCSTNP1-201ENST00000406229 144 ntBASIC5.61□□□□□ -1.51
CTNNA1P35221 RNU2-50P-201ENST00000410494 143 ntBASIC5.61□□□□□ -1.51
CTNNA1P35221 RN7SKP240-201ENST00000410583 375 ntBASIC5.61□□□□□ -1.51
CTNNA1P35221 PCNPP4-201ENST00000414817 517 ntBASIC5.61□□□□□ -1.51
CTNNA1P35221 BMS1P17-202ENST00000416720 316 ntBASIC5.61□□□□□ -1.51
CTNNA1P35221 SRSF1P1-201ENST00000424058 520 ntBASIC5.61□□□□□ -1.51
CTNNA1P35221 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.61□□□□□ -1.51
CTNNA1P35221 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.61□□□□□ -1.51
CTNNA1P35221 MORF4L1P4-201ENST00000450245 976 ntBASIC5.61□□□□□ -1.51
CTNNA1P35221 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CTNNA1P35221 AL354710.1-201ENST00000453641 246 ntBASIC5.61□□□□□ -1.51
CTNNA1P35221 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.61□□□□□ -1.51
CTNNA1P35221 RN7SL273P-201ENST00000481561 299 ntBASIC5.61□□□□□ -1.51
CTNNA1P35221 RN7SL814P-201ENST00000487715 300 ntBASIC5.61□□□□□ -1.51
CTNNA1P35221 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.61□□□□□ -1.51
CTNNA1P35221 HMGB1P44-201ENST00000508597 572 ntBASIC5.61□□□□□ -1.51
CTNNA1P35221 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.61□□□□□ -1.51
CTNNA1P35221 CYCSP22-201ENST00000517555 339 ntBASIC5.61□□□□□ -1.51
CTNNA1P35221 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.61□□□□□ -1.51
CTNNA1P35221 AC107918.3-201ENST00000533272 382 ntBASIC5.61□□□□□ -1.51
CTNNA1P35221 AP004607.2-201ENST00000533949 322 ntBASIC5.61□□□□□ -1.51
CTNNA1P35221 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.61□□□□□ -1.51
CTNNA1P35221 TOMM20P1-201ENST00000534518 427 ntBASIC5.61□□□□□ -1.51
CTNNA1P35221 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.61□□□□□ -1.51
CTNNA1P35221 AC125612.1-201ENST00000547580 377 ntBASIC5.61□□□□□ -1.51
CTNNA1P35221 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.61□□□□□ -1.51
CTNNA1P35221 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.61□□□□□ -1.51
CTNNA1P35221 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CTNNA1P35221 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.61□□□□□ -1.51
CTNNA1P35221 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.61□□□□□ -1.51
CTNNA1P35221 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.61□□□□□ -1.51
CTNNA1P35221 AC079315.1-201ENST00000602952 623 ntBASIC5.61□□□□□ -1.51
CTNNA1P35221 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.61□□□□□ -1.51
CTNNA1P35221 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.61□□□□□ -1.51
CTNNA1P35221 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.61□□□□□ -1.51
CTNNA1P35221 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CTNNA1P35221 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CTNNA1P35221 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CTNNA1P35221 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
CTNNA1P35221 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
CTNNA1P35221 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTNNA1P35221 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTNNA1P35221 AL731532.2-201ENST00000623542 1953 ntBASIC5.6□□□□□ -1.51
CTNNA1P35221 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.6□□□□□ -1.51
CTNNA1P35221 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CTNNA1P35221 BX005019.1-201ENST00000561881 1810 ntBASIC5.6□□□□□ -1.51
CTNNA1P35221 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTNNA1P35221 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
CTNNA1P35221 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CTNNA1P35221 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CTNNA1P35221 CASC19-248ENST00000641674 1356 ntBASIC5.6□□□□□ -1.51
CTNNA1P35221 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTNNA1P35221 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CTNNA1P35221 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTNNA1P35221 RNU4-2-201ENST00000365668 141 ntBASIC5.6□□□□□ -1.51
CTNNA1P35221 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CTNNA1P35221 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.6□□□□□ -1.51
CTNNA1P35221 RN7SKP222-201ENST00000410651 315 ntBASIC5.6□□□□□ -1.51
CTNNA1P35221 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CTNNA1P35221 RPL34P3-201ENST00000421454 338 ntBASIC5.6□□□□□ -1.51
CTNNA1P35221 SUMO2P3-201ENST00000438311 288 ntBASIC5.6□□□□□ -1.51
CTNNA1P35221 Z99127.2-201ENST00000441426 334 ntBASIC5.6□□□□□ -1.51
CTNNA1P35221 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.6□□□□□ -1.51
CTNNA1P35221 EEF1B2P6-201ENST00000445713 673 ntBASIC5.6□□□□□ -1.51
CTNNA1P35221 AL589765.3-201ENST00000446084 462 ntBASIC5.6□□□□□ -1.51
CTNNA1P35221 NOP56P2-201ENST00000447491 769 ntBASIC5.6□□□□□ -1.51
CTNNA1P35221 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.6□□□□□ -1.51
CTNNA1P35221 NPM1P19-201ENST00000450070 712 ntBASIC5.6□□□□□ -1.51
CTNNA1P35221 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.6□□□□□ -1.51
CTNNA1P35221 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTNNA1P35221 AC022133.1-201ENST00000490961 571 ntBASIC5.6□□□□□ -1.51
CTNNA1P35221 AC138866.2-201ENST00000508650 584 ntBASIC5.6□□□□□ -1.51
CTNNA1P35221 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.6□□□□□ -1.51
CTNNA1P35221 RNU6-491P-201ENST00000516099 110 ntBASIC5.6□□□□□ -1.51
CTNNA1P35221 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.6□□□□□ -1.51
CTNNA1P35221 OR10D4P-201ENST00000525892 951 ntBASIC5.6□□□□□ -1.51
CTNNA1P35221 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.6□□□□□ -1.51
CTNNA1P35221 AC024405.1-201ENST00000532521 1042 ntBASIC5.6□□□□□ -1.51
CTNNA1P35221 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CTNNA1P35221 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.6□□□□□ -1.51
CTNNA1P35221 AC006349.1-201ENST00000555526 235 ntBASIC5.6□□□□□ -1.51
CTNNA1P35221 AL049872.1-201ENST00000556323 322 ntBASIC5.6□□□□□ -1.51
CTNNA1P35221 AL390334.1-201ENST00000556395 450 ntBASIC5.6□□□□□ -1.51
CTNNA1P35221 AC107958.1-201ENST00000556576 290 ntBASIC5.6□□□□□ -1.51
CTNNA1P35221 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.6□□□□□ -1.51
CTNNA1P35221 AC134669.1-201ENST00000581275 672 ntBASIC5.6□□□□□ -1.51
CTNNA1P35221 MIR4472-2-201ENST00000582069 67 ntBASIC5.6□□□□□ -1.51
CTNNA1P35221 MIR4271-201ENST00000582451 67 ntBASIC5.6□□□□□ -1.51
CTNNA1P35221 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.6□□□□□ -1.51
CTNNA1P35221 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.6□□□□□ -1.51
CTNNA1P35221 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.6□□□□□ -1.51
CTNNA1P35221 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.6□□□□□ -1.51
CTNNA1P35221 AP004372.1-201ENST00000604842 844 ntBASIC5.6□□□□□ -1.51
CTNNA1P35221 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.6□□□□□ -1.51
CTNNA1P35221 AC084036.1-201ENST00000609190 508 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms