Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.52□□□□□ -1.53
CHRNA3P32297 AC006210.2-201ENST00000367074 1545 ntBASIC5.52□□□□□ -1.53
CHRNA3P32297 AL450345.1-202ENST00000605741 3881 ntBASIC5.52□□□□□ -1.53
CHRNA3P32297 AC107021.2-201ENST00000567714 2095 ntBASIC5.52□□□□□ -1.53
CHRNA3P32297 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.52□□□□□ -1.53
CHRNA3P32297 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
CHRNA3P32297 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.52□□□□□ -1.53
CHRNA3P32297 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHRNA3P32297 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CHRNA3P32297 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.52□□□□□ -1.53
CHRNA3P32297 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.51□□□□□ -1.53
CHRNA3P32297 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHRNA3P32297 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.51□□□□□ -1.53
CHRNA3P32297 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.51□□□□□ -1.53
CHRNA3P32297 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHRNA3P32297 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CHRNA3P32297 OR9K1P-202ENST00000641111 3217 ntBASIC5.51□□□□□ -1.53
CHRNA3P32297 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CHRNA3P32297 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.51□□□□□ -1.53
CHRNA3P32297 RNU6-729P-201ENST00000384399 107 ntBASIC5.51□□□□□ -1.53
CHRNA3P32297 AL133388.1-201ENST00000404509 287 ntBASIC5.51□□□□□ -1.53
CHRNA3P32297 RN7SKP278-201ENST00000410504 342 ntBASIC5.51□□□□□ -1.53
CHRNA3P32297 BMS1P13-201ENST00000417301 885 ntBASIC5.51□□□□□ -1.53
CHRNA3P32297 MGAT2P2-201ENST00000427194 797 ntBASIC5.51□□□□□ -1.53
CHRNA3P32297 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.51□□□□□ -1.53
CHRNA3P32297 GSTM5P1-201ENST00000434751 660 ntBASIC5.51□□□□□ -1.53
CHRNA3P32297 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.51□□□□□ -1.53
CHRNA3P32297 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.51□□□□□ -1.53
CHRNA3P32297 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.51□□□□□ -1.53
CHRNA3P32297 CCNHP1-201ENST00000513311 678 ntBASIC5.51□□□□□ -1.53
CHRNA3P32297 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.51□□□□□ -1.53
CHRNA3P32297 AP006245.2-201ENST00000522004 300 ntBASIC5.51□□□□□ -1.53
CHRNA3P32297 AP004607.2-201ENST00000533949 322 ntBASIC5.51□□□□□ -1.53
CHRNA3P32297 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.51□□□□□ -1.53
CHRNA3P32297 AC005341.1-201ENST00000571086 708 ntBASIC5.51□□□□□ -1.53
CHRNA3P32297 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CHRNA3P32297 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.51□□□□□ -1.53
CHRNA3P32297 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.51□□□□□ -1.53
CHRNA3P32297 AL162431.4-201ENST00000604674 411 ntBASIC5.51□□□□□ -1.53
CHRNA3P32297 AP000648.2-201ENST00000624182 404 ntBASIC5.51□□□□□ -1.53
CHRNA3P32297 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.51□□□□□ -1.53
CHRNA3P32297 AL590763.1-201ENST00000398297 1545 ntBASIC5.51□□□□□ -1.53
CHRNA3P32297 AC100778.3-201ENST00000580060 1750 ntBASIC5.51□□□□□ -1.53
CHRNA3P32297 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHRNA3P32297 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHRNA3P32297 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
CHRNA3P32297 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHRNA3P32297 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CHRNA3P32297 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CHRNA3P32297 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CHRNA3P32297 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CHRNA3P32297 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHRNA3P32297 MUC2-202ENST00000613187 4845 ntBASIC5.5□□□□□ -1.53
CHRNA3P32297 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
CHRNA3P32297 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHRNA3P32297 RNU6-697P-201ENST00000363348 107 ntBASIC5.5□□□□□ -1.53
CHRNA3P32297 AL353625.1-202ENST00000366273 571 ntBASIC5.5□□□□□ -1.53
CHRNA3P32297 OR13C3-201ENST00000374781 1108 ntBASIC5.5□□□□□ -1.53
CHRNA3P32297 GAPDHP15-201ENST00000398586 975 ntBASIC5.5□□□□□ -1.53
CHRNA3P32297 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.5□□□□□ -1.53
CHRNA3P32297 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.5□□□□□ -1.53
CHRNA3P32297 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.5□□□□□ -1.53
CHRNA3P32297 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.5□□□□□ -1.53
CHRNA3P32297 AC106901.1-201ENST00000425086 698 ntBASIC5.5□□□□□ -1.53
CHRNA3P32297 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.5□□□□□ -1.53
CHRNA3P32297 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.5□□□□□ -1.53
CHRNA3P32297 AL157385.1-201ENST00000446973 268 ntBASIC5.5□□□□□ -1.53
CHRNA3P32297 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.5□□□□□ -1.53
CHRNA3P32297 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.5□□□□□ -1.53
CHRNA3P32297 RN7SL799P-201ENST00000475891 298 ntBASIC5.5□□□□□ -1.53
CHRNA3P32297 AC058823.1-201ENST00000485315 474 ntBASIC5.5□□□□□ -1.53
CHRNA3P32297 RPS21P4-201ENST00000487122 248 ntBASIC5.5□□□□□ -1.53
CHRNA3P32297 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.5□□□□□ -1.53
CHRNA3P32297 AC027308.1-201ENST00000517993 110 ntBASIC5.5□□□□□ -1.53
CHRNA3P32297 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.5□□□□□ -1.53
CHRNA3P32297 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.5□□□□□ -1.53
CHRNA3P32297 HMGB1P40-201ENST00000525121 540 ntBASIC5.5□□□□□ -1.53
CHRNA3P32297 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CHRNA3P32297 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.5□□□□□ -1.53
CHRNA3P32297 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.5□□□□□ -1.53
CHRNA3P32297 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.5□□□□□ -1.53
CHRNA3P32297 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.5□□□□□ -1.53
CHRNA3P32297 RBM22P1-201ENST00000578589 1214 ntBASIC5.5□□□□□ -1.53
CHRNA3P32297 AC007448.1-201ENST00000582714 234 ntBASIC5.5□□□□□ -1.53
CHRNA3P32297 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
CHRNA3P32297 AC009597.2-201ENST00000604659 592 ntBASIC5.5□□□□□ -1.53
CHRNA3P32297 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.5□□□□□ -1.53
CHRNA3P32297 OR51C1P-201ENST00000608504 942 ntBASIC5.5□□□□□ -1.53
CHRNA3P32297 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CHRNA3P32297 AC073869.10-201ENST00000642016 354 ntBASIC5.5□□□□□ -1.53
CHRNA3P32297 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CHRNA3P32297 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CHRNA3P32297 THAP12P5-201ENST00000405864 2275 ntBASIC5.5□□□□□ -1.53
CHRNA3P32297 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHRNA3P32297 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.5□□□□□ -1.53
CHRNA3P32297 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CHRNA3P32297 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.5□□□□□ -1.53
CHRNA3P32297 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CHRNA3P32297 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.5□□□□□ -1.53
CHRNA3P32297 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms