Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.3□□□□□ -1.56
MSH3P20585 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.3□□□□□ -1.56
MSH3P20585 YWHABP2-201ENST00000540201 713 ntBASIC5.3□□□□□ -1.56
MSH3P20585 AL049779.2-201ENST00000553847 315 ntBASIC5.3□□□□□ -1.56
MSH3P20585 AL359219.2-201ENST00000555184 348 ntBASIC5.3□□□□□ -1.56
MSH3P20585 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.3□□□□□ -1.56
MSH3P20585 AC012414.2-201ENST00000559474 187 ntBASIC5.3□□□□□ -1.56
MSH3P20585 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.3□□□□□ -1.56
MSH3P20585 AC108738.1-201ENST00000603703 237 ntBASIC5.3□□□□□ -1.56
MSH3P20585 AC006363.1-201ENST00000603806 463 ntBASIC5.3□□□□□ -1.56
MSH3P20585 AC005252.1-201ENST00000604518 1063 ntBASIC5.3□□□□□ -1.56
MSH3P20585 OR7M1P-201ENST00000608946 533 ntBASIC5.3□□□□□ -1.56
MSH3P20585 AC022467.1-201ENST00000614738 749 ntBASIC5.3□□□□□ -1.56
MSH3P20585 AL162233.1-201ENST00000620014 944 ntBASIC5.3□□□□□ -1.56
MSH3P20585 AC136428.4-201ENST00000634254 1155 ntBASIC5.3□□□□□ -1.56
MSH3P20585 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MSH3P20585 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MSH3P20585 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
MSH3P20585 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
MSH3P20585 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
MSH3P20585 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
MSH3P20585 AC079298.1-201ENST00000625026 1619 ntBASIC5.3□□□□□ -1.56
MSH3P20585 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MSH3P20585 HSPA8P14-201ENST00000552265 1805 ntBASIC5.3□□□□□ -1.56
MSH3P20585 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
MSH3P20585 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
MSH3P20585 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
MSH3P20585 DDX18P6-201ENST00000450119 1997 ntBASIC5.29□□□□□ -1.56
MSH3P20585 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
MSH3P20585 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.29□□□□□ -1.56
MSH3P20585 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.29□□□□□ -1.56
MSH3P20585 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
MSH3P20585 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
MSH3P20585 AL603750.1-201ENST00000624216 1717 ntBASIC5.29□□□□□ -1.56
MSH3P20585 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
MSH3P20585 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.29□□□□□ -1.56
MSH3P20585 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
MSH3P20585 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
MSH3P20585 RNU1-19P-201ENST00000363306 165 ntBASIC5.29□□□□□ -1.56
MSH3P20585 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
MSH3P20585 RNA5SP339-201ENST00000390987 122 ntBASIC5.29□□□□□ -1.56
MSH3P20585 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
MSH3P20585 AL589655.1-201ENST00000405398 482 ntBASIC5.29□□□□□ -1.56
MSH3P20585 OR4K12P-201ENST00000406538 961 ntBASIC5.29□□□□□ -1.56
MSH3P20585 RPL35AP24-201ENST00000413846 330 ntBASIC5.29□□□□□ -1.56
MSH3P20585 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.29□□□□□ -1.56
MSH3P20585 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.29□□□□□ -1.56
MSH3P20585 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.29□□□□□ -1.56
MSH3P20585 RPL12P43-201ENST00000420608 499 ntBASIC5.29□□□□□ -1.56
MSH3P20585 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
MSH3P20585 FAR1P1-201ENST00000427163 934 ntBASIC5.29□□□□□ -1.56
MSH3P20585 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.29□□□□□ -1.56
MSH3P20585 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.29□□□□□ -1.56
MSH3P20585 MTND6P5-201ENST00000448266 512 ntBASIC5.29□□□□□ -1.56
MSH3P20585 C1DP3-201ENST00000455013 423 ntBASIC5.29□□□□□ -1.56
MSH3P20585 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.29□□□□□ -1.56
MSH3P20585 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
MSH3P20585 AC022133.1-201ENST00000490961 571 ntBASIC5.29□□□□□ -1.56
MSH3P20585 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.29□□□□□ -1.56
MSH3P20585 IGBP1P4-201ENST00000503202 879 ntBASIC5.29□□□□□ -1.56
MSH3P20585 AC011411.1-201ENST00000509592 876 ntBASIC5.29□□□□□ -1.56
MSH3P20585 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.29□□□□□ -1.56
MSH3P20585 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.29□□□□□ -1.56
MSH3P20585 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.29□□□□□ -1.56
MSH3P20585 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.29□□□□□ -1.56
MSH3P20585 AC126177.5-201ENST00000549599 178 ntBASIC5.29□□□□□ -1.56
MSH3P20585 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
MSH3P20585 RN7SL290P-201ENST00000578661 300 ntBASIC5.29□□□□□ -1.56
MSH3P20585 FAM60CP-201ENST00000591086 664 ntBASIC5.29□□□□□ -1.56
MSH3P20585 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.29□□□□□ -1.56
MSH3P20585 AP003400.3-201ENST00000624904 346 ntBASIC5.29□□□□□ -1.56
MSH3P20585 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.29□□□□□ -1.56
MSH3P20585 AC099654.6-201ENST00000636487 512 ntBASIC5.29□□□□□ -1.56
MSH3P20585 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
MSH3P20585 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
MSH3P20585 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
MSH3P20585 AC019072.1-201ENST00000604535 1551 ntBASIC5.29□□□□□ -1.56
MSH3P20585 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.28□□□□□ -1.56
MSH3P20585 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
MSH3P20585 CUL4AP1-201ENST00000514750 1863 ntBASIC5.28□□□□□ -1.56
MSH3P20585 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.28□□□□□ -1.56
MSH3P20585 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
MSH3P20585 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
MSH3P20585 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
MSH3P20585 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
MSH3P20585 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.28□□□□□ -1.56
MSH3P20585 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
MSH3P20585 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.28□□□□□ -1.56
MSH3P20585 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
MSH3P20585 SNORA67-201ENST00000384423 137 ntBASIC5.28□□□□□ -1.56
MSH3P20585 EI24P3-201ENST00000399046 1062 ntBASIC5.28□□□□□ -1.56
MSH3P20585 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC5.28□□□□□ -1.56
MSH3P20585 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.28□□□□□ -1.56
MSH3P20585 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
MSH3P20585 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.28□□□□□ -1.56
MSH3P20585 AC090804.1-201ENST00000448870 490 ntBASIC5.28□□□□□ -1.56
MSH3P20585 GAPDHP14-201ENST00000450472 937 ntBASIC5.28□□□□□ -1.56
MSH3P20585 AL606490.1-201ENST00000452266 765 ntBASIC5.28□□□□□ -1.56
MSH3P20585 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.28□□□□□ -1.56
MSH3P20585 CYCSP53-201ENST00000455540 265 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms