Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.41□□□□□ -1.54
PCNAP12004 MTATP6P2-201ENST00000603319 678 ntBASIC5.41□□□□□ -1.54
PCNAP12004 AP004372.1-201ENST00000604842 844 ntBASIC5.41□□□□□ -1.54
PCNAP12004 AC018645.2-201ENST00000609151 472 ntBASIC5.41□□□□□ -1.54
PCNAP12004 AP005431.1-201ENST00000618479 319 ntBASIC5.41□□□□□ -1.54
PCNAP12004 AC009269.6-201ENST00000621778 588 ntBASIC5.41□□□□□ -1.54
PCNAP12004 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCNAP12004 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PCNAP12004 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCNAP12004 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PCNAP12004 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCNAP12004 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PCNAP12004 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCNAP12004 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCNAP12004 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
PCNAP12004 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCNAP12004 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCNAP12004 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.41□□□□□ -1.54
PCNAP12004 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCNAP12004 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCNAP12004 AL031595.2-201ENST00000624215 19071 ntBASIC5.41□□□□□ -1.54
PCNAP12004 AC005332.5-201ENST00000591222 2919 ntBASIC5.41□□□□□ -1.54
PCNAP12004 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCNAP12004 AL359715.4-201ENST00000606629 1436 ntBASIC5.4□□□□□ -1.54
PCNAP12004 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.4□□□□□ -1.54
PCNAP12004 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCNAP12004 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCNAP12004 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.4□□□□□ -1.54
PCNAP12004 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.4□□□□□ -1.54
PCNAP12004 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.4□□□□□ -1.54
PCNAP12004 TCP1P3-201ENST00000414406 1498 ntBASIC5.4□□□□□ -1.54
PCNAP12004 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.4□□□□□ -1.54
PCNAP12004 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCNAP12004 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCNAP12004 GAPDHP24-201ENST00000328713 983 ntBASIC5.4□□□□□ -1.54
PCNAP12004 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCNAP12004 AC023490.2-201ENST00000359859 470 ntBASIC5.4□□□□□ -1.54
PCNAP12004 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.4□□□□□ -1.54
PCNAP12004 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PCNAP12004 VDAC2P1-201ENST00000399358 958 ntBASIC5.4□□□□□ -1.54
PCNAP12004 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCNAP12004 RPS3AP2-201ENST00000407190 754 ntBASIC5.4□□□□□ -1.54
PCNAP12004 AL133482.1-201ENST00000415988 498 ntBASIC5.4□□□□□ -1.54
PCNAP12004 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.4□□□□□ -1.54
PCNAP12004 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.4□□□□□ -1.54
PCNAP12004 RNF10P1-201ENST00000418589 369 ntBASIC5.4□□□□□ -1.54
PCNAP12004 NENFP1-201ENST00000419476 466 ntBASIC5.4□□□□□ -1.54
PCNAP12004 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.4□□□□□ -1.54
PCNAP12004 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCNAP12004 RPS3P2-201ENST00000421346 701 ntBASIC5.4□□□□□ -1.54
PCNAP12004 AC006065.1-201ENST00000422539 802 ntBASIC5.4□□□□□ -1.54
PCNAP12004 MTND4LP13-201ENST00000425022 298 ntBASIC5.4□□□□□ -1.54
PCNAP12004 NANOGP9-201ENST00000439890 892 ntBASIC5.4□□□□□ -1.54
PCNAP12004 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCNAP12004 RNFT1P2-201ENST00000443064 757 ntBASIC5.4□□□□□ -1.54
PCNAP12004 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCNAP12004 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCNAP12004 FCF1P6-201ENST00000456841 595 ntBASIC5.4□□□□□ -1.54
PCNAP12004 ATP5G1P3-201ENST00000463301 410 ntBASIC5.4□□□□□ -1.54
PCNAP12004 NDUFA5P5-201ENST00000468361 342 ntBASIC5.4□□□□□ -1.54
PCNAP12004 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.4□□□□□ -1.54
PCNAP12004 ATP5LP5-201ENST00000483050 299 ntBASIC5.4□□□□□ -1.54
PCNAP12004 EIF3LP3-201ENST00000495197 822 ntBASIC5.4□□□□□ -1.54
PCNAP12004 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.4□□□□□ -1.54
PCNAP12004 AC119751.4-201ENST00000507498 357 ntBASIC5.4□□□□□ -1.54
PCNAP12004 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.4□□□□□ -1.54
PCNAP12004 RN7SKP70-201ENST00000516655 271 ntBASIC5.4□□□□□ -1.54
PCNAP12004 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.4□□□□□ -1.54
PCNAP12004 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.4□□□□□ -1.54
PCNAP12004 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.4□□□□□ -1.54
PCNAP12004 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.4□□□□□ -1.54
PCNAP12004 IGKV2-4-201ENST00000523070 340 ntBASIC5.4□□□□□ -1.54
PCNAP12004 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.4□□□□□ -1.54
PCNAP12004 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.4□□□□□ -1.54
PCNAP12004 EIF4A2P5-201ENST00000529914 499 ntBASIC5.4□□□□□ -1.54
PCNAP12004 AC122688.1-201ENST00000541494 223 ntBASIC5.4□□□□□ -1.54
PCNAP12004 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.4□□□□□ -1.54
PCNAP12004 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.4□□□□□ -1.54
PCNAP12004 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.4□□□□□ -1.54
PCNAP12004 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.4□□□□□ -1.54
PCNAP12004 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.4□□□□□ -1.54
PCNAP12004 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.4□□□□□ -1.54
PCNAP12004 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.4□□□□□ -1.54
PCNAP12004 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.4□□□□□ -1.54
PCNAP12004 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.4□□□□□ -1.54
PCNAP12004 MIR4311-201ENST00000580794 100 ntBASIC5.4□□□□□ -1.54
PCNAP12004 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.4□□□□□ -1.54
PCNAP12004 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.4□□□□□ -1.54
PCNAP12004 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.4□□□□□ -1.54
PCNAP12004 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.4□□□□□ -1.54
PCNAP12004 AC133794.1-201ENST00000602731 914 ntBASIC5.4□□□□□ -1.54
PCNAP12004 AC015849.2-201ENST00000605738 409 ntBASIC5.4□□□□□ -1.54
PCNAP12004 FAM72A-208ENST00000607379 1139 ntBASIC5.4□□□□□ -1.54
PCNAP12004 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.4□□□□□ -1.54
PCNAP12004 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.4□□□□□ -1.54
PCNAP12004 AC090617.9-201ENST00000623751 147 ntBASIC5.4□□□□□ -1.54
PCNAP12004 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.4□□□□□ -1.54
PCNAP12004 RLIMP2-201ENST00000427891 1563 ntBASIC5.4□□□□□ -1.55
PCNAP12004 AC091305.2-201ENST00000624049 1576 ntBASIC5.4□□□□□ -1.55
PCNAP12004 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms