Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 RPS29P10-201ENST00000439197 166 ntBASIC4.07□□□□□ -1.76
CD28P10747 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.07□□□□□ -1.76
CD28P10747 RPS3AP41-201ENST00000462701 778 ntBASIC4.07□□□□□ -1.76
CD28P10747 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CD28P10747 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.07□□□□□ -1.76
CD28P10747 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.07□□□□□ -1.76
CD28P10747 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.07□□□□□ -1.76
CD28P10747 AC091912.1-201ENST00000511351 248 ntBASIC4.07□□□□□ -1.76
CD28P10747 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.07□□□□□ -1.76
CD28P10747 SCARNA20.4-201ENST00000516969 131 ntBASIC4.07□□□□□ -1.76
CD28P10747 OR5AZ1P-201ENST00000527448 943 ntBASIC4.07□□□□□ -1.76
CD28P10747 BRD9P1-201ENST00000529855 560 ntBASIC4.07□□□□□ -1.76
CD28P10747 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.07□□□□□ -1.76
CD28P10747 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CD28P10747 AL390726.5-202ENST00000564800 256 ntBASIC4.07□□□□□ -1.76
CD28P10747 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CD28P10747 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.07□□□□□ -1.76
CD28P10747 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.07□□□□□ -1.76
CD28P10747 AC009237.13-201ENST00000603193 276 ntBASIC4.07□□□□□ -1.76
CD28P10747 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.07□□□□□ -1.76
CD28P10747 uc_338.7-201ENST00000621834 124 ntBASIC4.07□□□□□ -1.76
CD28P10747 AC091953.3-201ENST00000623220 236 ntBASIC4.07□□□□□ -1.76
CD28P10747 AC091905.4-201ENST00000623432 202 ntBASIC4.07□□□□□ -1.76
CD28P10747 AP003400.3-201ENST00000624904 346 ntBASIC4.07□□□□□ -1.76
CD28P10747 AC099654.6-201ENST00000636487 512 ntBASIC4.07□□□□□ -1.76
CD28P10747 AC135068.12-201ENST00000637370 931 ntBASIC4.07□□□□□ -1.76
CD28P10747 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.07□□□□□ -1.76
CD28P10747 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
CD28P10747 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CD28P10747 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.07□□□□□ -1.76
CD28P10747 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CD28P10747 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CD28P10747 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CD28P10747 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
CD28P10747 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.07□□□□□ -1.76
CD28P10747 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.07□□□□□ -1.76
CD28P10747 INTS6P1-201ENST00000504674 2530 ntBASIC4.06□□□□□ -1.76
CD28P10747 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CD28P10747 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
CD28P10747 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.06□□□□□ -1.76
CD28P10747 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.06□□□□□ -1.76
CD28P10747 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CD28P10747 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.06□□□□□ -1.76
CD28P10747 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CD28P10747 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
CD28P10747 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CD28P10747 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CD28P10747 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CD28P10747 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.06□□□□□ -1.76
CD28P10747 RNA5SP90-201ENST00000364801 99 ntBASIC4.06□□□□□ -1.76
CD28P10747 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.06□□□□□ -1.76
CD28P10747 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.06□□□□□ -1.76
CD28P10747 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CD28P10747 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CD28P10747 CBX1P3-201ENST00000413296 527 ntBASIC4.06□□□□□ -1.76
CD28P10747 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.06□□□□□ -1.76
CD28P10747 RPS4XP16-201ENST00000427198 791 ntBASIC4.06□□□□□ -1.76
CD28P10747 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.06□□□□□ -1.76
CD28P10747 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.06□□□□□ -1.76
CD28P10747 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.06□□□□□ -1.76
CD28P10747 AL359265.1-201ENST00000440296 795 ntBASIC4.06□□□□□ -1.76
CD28P10747 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.06□□□□□ -1.76
CD28P10747 VN1R96P-201ENST00000446052 858 ntBASIC4.06□□□□□ -1.76
CD28P10747 RPS3AP53-201ENST00000454716 778 ntBASIC4.06□□□□□ -1.76
CD28P10747 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.06□□□□□ -1.76
CD28P10747 AC097484.1-201ENST00000471148 389 ntBASIC4.06□□□□□ -1.76
CD28P10747 NPM1P28-201ENST00000492269 840 ntBASIC4.06□□□□□ -1.76
CD28P10747 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.06□□□□□ -1.76
CD28P10747 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.06□□□□□ -1.76
CD28P10747 RNA5SP228-201ENST00000516232 133 ntBASIC4.06□□□□□ -1.76
CD28P10747 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.06□□□□□ -1.76
CD28P10747 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.06□□□□□ -1.76
CD28P10747 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.06□□□□□ -1.76
CD28P10747 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.06□□□□□ -1.76
CD28P10747 AC234775.3-201ENST00000564612 656 ntBASIC4.06□□□□□ -1.76
CD28P10747 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.06□□□□□ -1.76
CD28P10747 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.06□□□□□ -1.76
CD28P10747 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.06□□□□□ -1.76
CD28P10747 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.06□□□□□ -1.76
CD28P10747 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CD28P10747 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.06□□□□□ -1.76
CD28P10747 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.06□□□□□ -1.76
CD28P10747 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.06□□□□□ -1.76
CD28P10747 AC087783.2-201ENST00000605070 562 ntBASIC4.06□□□□□ -1.76
CD28P10747 RNU6-84P-201ENST00000607737 102 ntBASIC4.06□□□□□ -1.76
CD28P10747 MIR6820-201ENST00000611508 62 ntBASIC4.06□□□□□ -1.76
CD28P10747 MIR6798-201ENST00000612887 67 ntBASIC4.06□□□□□ -1.76
CD28P10747 AP003400.2-201ENST00000624036 666 ntBASIC4.06□□□□□ -1.76
CD28P10747 SMG1P4-204ENST00000523028 4131 ntBASIC4.06□□□□□ -1.76
CD28P10747 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.06□□□□□ -1.76
CD28P10747 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.06□□□□□ -1.76
CD28P10747 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CD28P10747 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CD28P10747 AC009962.1-201ENST00000567327 3813 ntBASIC4.06□□□□□ -1.76
CD28P10747 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CD28P10747 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
CD28P10747 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.06□□□□□ -1.76
CD28P10747 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CD28P10747 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.05□□□□□ -1.76
CD28P10747 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms