Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL1P09341 SLC25A36P1-201ENST00000590111 465 ntBASIC3.88□□□□□ -1.79
CXCL1P09341 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CXCL1P09341 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC3.88□□□□□ -1.79
CXCL1P09341 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL1P09341 MIR6774-201ENST00000614651 70 ntBASIC3.88□□□□□ -1.79
CXCL1P09341 AL118522.2-201ENST00000616045 615 ntBASIC3.88□□□□□ -1.79
CXCL1P09341 RNF123-214ENST00000629802 207 ntTSL 5 BASIC3.88□□□□□ -1.79
CXCL1P09341 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC3.88□□□□□ -1.79
CXCL1P09341 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC3.88□□□□□ -1.79
CXCL1P09341 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC3.88□□□□□ -1.79
CXCL1P09341 AP000542.2-201ENST00000623199 6179 ntBASIC3.88□□□□□ -1.79
CXCL1P09341 AC068446.1-201ENST00000556425 1549 ntBASIC3.88□□□□□ -1.79
CXCL1P09341 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL1P09341 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL1P09341 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL1P09341 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.88□□□□□ -1.79
CXCL1P09341 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL1P09341 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC3.88□□□□□ -1.79
CXCL1P09341 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CXCL1P09341 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.87□□□□□ -1.79
CXCL1P09341 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CXCL1P09341 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CXCL1P09341 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
CXCL1P09341 FGG-201ENST00000336098 1659 ntTSL 2 BASIC3.87□□□□□ -1.79
CXCL1P09341 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC3.87□□□□□ -1.79
CXCL1P09341 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CXCL1P09341 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CXCL1P09341 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.87□□□□□ -1.79
CXCL1P09341 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
CXCL1P09341 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CXCL1P09341 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CXCL1P09341 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.87□□□□□ -1.79
CXCL1P09341 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CXCL1P09341 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CXCL1P09341 AL672167.2-201ENST00000377164 879 ntBASIC3.87□□□□□ -1.79
CXCL1P09341 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CXCL1P09341 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC3.87□□□□□ -1.79
CXCL1P09341 RPS12P5-201ENST00000423449 371 ntBASIC3.87□□□□□ -1.79
CXCL1P09341 AL133173.1-201ENST00000423458 397 ntBASIC3.87□□□□□ -1.79
CXCL1P09341 PPIAP13-201ENST00000434706 478 ntBASIC3.87□□□□□ -1.79
CXCL1P09341 CLUHP1-201ENST00000435012 1190 ntBASIC3.87□□□□□ -1.79
CXCL1P09341 ARAFP2-201ENST00000440565 559 ntBASIC3.87□□□□□ -1.79
CXCL1P09341 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC3.87□□□□□ -1.79
CXCL1P09341 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
CXCL1P09341 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC3.87□□□□□ -1.79
CXCL1P09341 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC3.87□□□□□ -1.79
CXCL1P09341 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC3.87□□□□□ -1.79
CXCL1P09341 OR5H7P-201ENST00000514084 930 ntBASIC3.87□□□□□ -1.79
CXCL1P09341 AC116917.1-201ENST00000520558 305 ntBASIC3.87□□□□□ -1.79
CXCL1P09341 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC3.87□□□□□ -1.79
CXCL1P09341 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.87□□□□□ -1.79
CXCL1P09341 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC3.87□□□□□ -1.79
CXCL1P09341 AL358913.1-201ENST00000554342 121 ntBASIC3.87□□□□□ -1.79
CXCL1P09341 AC026826.3-201ENST00000561747 158 ntBASIC3.87□□□□□ -1.79
CXCL1P09341 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC3.87□□□□□ -1.79
CXCL1P09341 AC060766.1-201ENST00000590824 627 ntBASIC3.87□□□□□ -1.79
CXCL1P09341 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC3.87□□□□□ -1.79
CXCL1P09341 AC008814.1-201ENST00000603797 406 ntBASIC3.87□□□□□ -1.79
CXCL1P09341 BNIP3P35-201ENST00000604530 490 ntBASIC3.87□□□□□ -1.79
CXCL1P09341 AC005828.7-201ENST00000607331 556 ntBASIC3.87□□□□□ -1.79
CXCL1P09341 MIR7154-201ENST00000620673 73 ntBASIC3.87□□□□□ -1.79
CXCL1P09341 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC3.87□□□□□ -1.79
CXCL1P09341 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.87□□□□□ -1.79
CXCL1P09341 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC3.87□□□□□ -1.79
CXCL1P09341 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CXCL1P09341 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CXCL1P09341 ALB-214ENST00000509063 1911 ntTSL 5 BASIC3.87□□□□□ -1.79
CXCL1P09341 EOGT-210ENST00000615922 1931 ntBASIC3.87□□□□□ -1.79
CXCL1P09341 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CXCL1P09341 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CXCL1P09341 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
CXCL1P09341 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CXCL1P09341 SRRM1P3-201ENST00000426911 2678 ntBASIC3.87□□□□□ -1.79
CXCL1P09341 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CXCL1P09341 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CXCL1P09341 VN2R3P-201ENST00000422626 1412 ntBASIC3.87□□□□□ -1.79
CXCL1P09341 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CXCL1P09341 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.86□□□□□ -1.79
CXCL1P09341 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CXCL1P09341 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC3.86□□□□□ -1.79
CXCL1P09341 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CXCL1P09341 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CXCL1P09341 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.86□□□□□ -1.79
CXCL1P09341 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CXCL1P09341 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.86□□□□□ -1.79
CXCL1P09341 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.86□□□□□ -1.79
CXCL1P09341 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CXCL1P09341 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CXCL1P09341 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.86□□□□□ -1.79
CXCL1P09341 RNA5SP52-201ENST00000362448 134 ntBASIC3.86□□□□□ -1.79
CXCL1P09341 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CXCL1P09341 HMGB1P20-201ENST00000402555 677 ntBASIC3.86□□□□□ -1.79
CXCL1P09341 SRSF1P1-201ENST00000424058 520 ntBASIC3.86□□□□□ -1.79
CXCL1P09341 BX323845.3-201ENST00000428215 527 ntBASIC3.86□□□□□ -1.79
CXCL1P09341 COX6CP13-201ENST00000428703 226 ntBASIC3.86□□□□□ -1.79
CXCL1P09341 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.86□□□□□ -1.79
CXCL1P09341 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC3.86□□□□□ -1.79
CXCL1P09341 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC3.86□□□□□ -1.79
CXCL1P09341 GSTM5P1-201ENST00000434751 660 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms