Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HOXC4P09017 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
HOXC4P09017 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HOXC4P09017 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.04□□□□□ -1.6
HOXC4P09017 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HOXC4P09017 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXC4P09017 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXC4P09017 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
HOXC4P09017 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC4P09017 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
HOXC4P09017 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC4P09017 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXC4P09017 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXC4P09017 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC4P09017 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.03□□□□□ -1.6
HOXC4P09017 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC4P09017 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC4P09017 RNA5SP223-201ENST00000365174 120 ntBASIC5.03□□□□□ -1.6
HOXC4P09017 AL353625.1-202ENST00000366273 571 ntBASIC5.03□□□□□ -1.6
HOXC4P09017 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC4P09017 AP002530.1-201ENST00000405705 684 ntBASIC5.03□□□□□ -1.6
HOXC4P09017 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC4P09017 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXC4P09017 HSPE1P16-201ENST00000426640 348 ntBASIC5.03□□□□□ -1.6
HOXC4P09017 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC4P09017 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXC4P09017 RPL31P44-201ENST00000447680 377 ntBASIC5.03□□□□□ -1.6
HOXC4P09017 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC4P09017 RN7SL441P-201ENST00000492388 296 ntBASIC5.03□□□□□ -1.6
HOXC4P09017 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC4P09017 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC4P09017 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXC4P09017 AC110775.1-201ENST00000513721 462 ntBASIC5.03□□□□□ -1.6
HOXC4P09017 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC4P09017 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXC4P09017 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXC4P09017 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HOXC4P09017 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC4P09017 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC4P09017 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXC4P09017 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC4P09017 RN7SL290P-201ENST00000578661 300 ntBASIC5.03□□□□□ -1.6
HOXC4P09017 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC4P09017 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXC4P09017 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC4P09017 AC105254.2-201ENST00000603636 436 ntBASIC5.03□□□□□ -1.6
HOXC4P09017 AC119501.1-201ENST00000603646 475 ntBASIC5.03□□□□□ -1.6
HOXC4P09017 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXC4P09017 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC4P09017 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.03□□□□□ -1.6
HOXC4P09017 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXC4P09017 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXC4P09017 TET1P1-201ENST00000426627 2301 ntBASIC5.03□□□□□ -1.6
HOXC4P09017 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXC4P09017 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXC4P09017 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC4P09017 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXC4P09017 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC4P09017 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXC4P09017 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
HOXC4P09017 AC104260.2-201ENST00000623551 3497 ntBASIC5.03□□□□□ -1.6
HOXC4P09017 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC4P09017 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC4P09017 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.03□□□□□ -1.6
HOXC4P09017 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC4P09017 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXC4P09017 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC4P09017 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXC4P09017 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC4P09017 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC4P09017 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC4P09017 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC4P09017 MIPEPP2-201ENST00000422560 1819 ntBASIC5.02□□□□□ -1.61
HOXC4P09017 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC4P09017 TCP1P3-201ENST00000414406 1498 ntBASIC5.02□□□□□ -1.61
HOXC4P09017 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC4P09017 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
HOXC4P09017 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC4P09017 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC4P09017 RNA5SP428-201ENST00000365129 132 ntBASIC5.02□□□□□ -1.61
HOXC4P09017 RNA5SP455-201ENST00000365190 119 ntBASIC5.02□□□□□ -1.61
HOXC4P09017 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC4P09017 SNORA51.8-201ENST00000384234 132 ntBASIC5.02□□□□□ -1.61
HOXC4P09017 SNORA66-201ENST00000384792 133 ntBASIC5.02□□□□□ -1.61
HOXC4P09017 RNU6-233P-201ENST00000410845 141 ntBASIC5.02□□□□□ -1.61
HOXC4P09017 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXC4P09017 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXC4P09017 MTND2P40-201ENST00000436718 841 ntBASIC5.02□□□□□ -1.61
HOXC4P09017 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXC4P09017 RPL34P20-201ENST00000442771 351 ntBASIC5.02□□□□□ -1.61
HOXC4P09017 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXC4P09017 GOLGA5P1-201ENST00000507317 980 ntBASIC5.02□□□□□ -1.61
HOXC4P09017 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXC4P09017 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC4P09017 AC016559.2-201ENST00000510759 359 ntBASIC5.02□□□□□ -1.61
HOXC4P09017 RNA5SP43-201ENST00000516559 110 ntBASIC5.02□□□□□ -1.61
HOXC4P09017 AC092709.1-201ENST00000521355 1045 ntBASIC5.02□□□□□ -1.61
HOXC4P09017 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXC4P09017 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC4P09017 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms