Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC092647.3-201ENST00000443044 633 ntBASIC5.05□□□□□ -1.6
HLA-DQB2P05538 AL137845.2-201ENST00000444292 988 ntBASIC5.05□□□□□ -1.6
HLA-DQB2P05538 AC073073.1-201ENST00000493920 463 ntBASIC5.05□□□□□ -1.6
HLA-DQB2P05538 AC026782.2-201ENST00000510845 636 ntBASIC5.05□□□□□ -1.6
HLA-DQB2P05538 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DQB2P05538 AC110775.1-201ENST00000513721 462 ntBASIC5.05□□□□□ -1.6
HLA-DQB2P05538 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DQB2P05538 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DQB2P05538 AC087821.1-201ENST00000623639 567 ntBASIC5.05□□□□□ -1.6
HLA-DQB2P05538 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DQB2P05538 MUC2-202ENST00000613187 4845 ntBASIC5.05□□□□□ -1.6
HLA-DQB2P05538 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DQB2P05538 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DQB2P05538 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
HLA-DQB2P05538 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DQB2P05538 AC007996.1-201ENST00000620414 2821 ntBASIC5.05□□□□□ -1.6
HLA-DQB2P05538 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
HLA-DQB2P05538 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DQB2P05538 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DQB2P05538 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DQB2P05538 CASC19-281ENST00000642118 1554 ntBASIC5.04□□□□□ -1.6
HLA-DQB2P05538 HSPA8P18-201ENST00000439846 1928 ntBASIC5.04□□□□□ -1.6
HLA-DQB2P05538 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HLA-DQB2P05538 RN7SKP278-201ENST00000410504 342 ntBASIC5.04□□□□□ -1.6
HLA-DQB2P05538 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HLA-DQB2P05538 RPL23AP27-201ENST00000415161 451 ntBASIC5.04□□□□□ -1.6
HLA-DQB2P05538 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DQB2P05538 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DQB2P05538 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DQB2P05538 MRPS33P2-201ENST00000507850 322 ntBASIC5.04□□□□□ -1.6
HLA-DQB2P05538 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DQB2P05538 HMGN2P6-201ENST00000551091 273 ntBASIC5.04□□□□□ -1.6
HLA-DQB2P05538 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.04□□□□□ -1.6
HLA-DQB2P05538 HMGN2P47-201ENST00000559378 272 ntBASIC5.04□□□□□ -1.6
HLA-DQB2P05538 AC087763.1-201ENST00000603391 286 ntBASIC5.04□□□□□ -1.6
HLA-DQB2P05538 AC104687.2-201ENST00000604442 342 ntBASIC5.04□□□□□ -1.6
HLA-DQB2P05538 Z95327.3-201ENST00000610385 572 ntBASIC5.04□□□□□ -1.6
HLA-DQB2P05538 AC018445.2-201ENST00000622987 260 ntBASIC5.04□□□□□ -1.6
HLA-DQB2P05538 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.04□□□□□ -1.6
HLA-DQB2P05538 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.04□□□□□ -1.6
HLA-DQB2P05538 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DQB2P05538 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DQB2P05538 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DQB2P05538 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DQB2P05538 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DQB2P05538 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DQB2P05538 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DQB2P05538 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DQB2P05538 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DQB2P05538 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HLA-DQB2P05538 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DQB2P05538 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DQB2P05538 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HLA-DQB2P05538 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DQB2P05538 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HLA-DQB2P05538 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HLA-DQB2P05538 RNA5SP305-201ENST00000362665 119 ntBASIC5.03□□□□□ -1.6
HLA-DQB2P05538 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DQB2P05538 AL078599.1-201ENST00000402075 293 ntBASIC5.03□□□□□ -1.6
HLA-DQB2P05538 SPTLC1P2-201ENST00000407089 121 ntBASIC5.03□□□□□ -1.6
HLA-DQB2P05538 Z68694.1-201ENST00000413929 841 ntBASIC5.03□□□□□ -1.6
HLA-DQB2P05538 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DQB2P05538 AL627308.1-201ENST00000435693 821 ntBASIC5.03□□□□□ -1.6
HLA-DQB2P05538 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DQB2P05538 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DQB2P05538 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DQB2P05538 RN7SL515P-201ENST00000463999 297 ntBASIC5.03□□□□□ -1.6
HLA-DQB2P05538 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DQB2P05538 RPL7AP6-201ENST00000477943 801 ntBASIC5.03□□□□□ -1.6
HLA-DQB2P05538 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DQB2P05538 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DQB2P05538 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.03□□□□□ -1.6
HLA-DQB2P05538 RPL23AP53-201ENST00000521854 457 ntBASIC5.03□□□□□ -1.6
HLA-DQB2P05538 AC005868.1-201ENST00000536421 331 ntBASIC5.03□□□□□ -1.6
HLA-DQB2P05538 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DQB2P05538 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DQB2P05538 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DQB2P05538 AL049794.2-201ENST00000616301 365 ntBASIC5.03□□□□□ -1.6
HLA-DQB2P05538 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.03□□□□□ -1.6
HLA-DQB2P05538 AC019206.1-201ENST00000621938 425 ntBASIC5.03□□□□□ -1.6
HLA-DQB2P05538 MIR6719-201ENST00000622428 87 ntBASIC5.03□□□□□ -1.6
HLA-DQB2P05538 AP002799.1-201ENST00000623552 423 ntBASIC5.03□□□□□ -1.6
HLA-DQB2P05538 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DQB2P05538 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DQB2P05538 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HLA-DQB2P05538 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DQB2P05538 AL449283.1-201ENST00000602631 3403 ntBASIC5.03□□□□□ -1.6
HLA-DQB2P05538 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQB2P05538 MAPK10-338ENST00000641647 3362 ntBASIC5.02□□□□□ -1.61
HLA-DQB2P05538 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
HLA-DQB2P05538 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
HLA-DQB2P05538 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DQB2P05538 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQB2P05538 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQB2P05538 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
HLA-DQB2P05538 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQB2P05538 AC017079.1-201ENST00000333650 415 ntBASIC5.02□□□□□ -1.61
HLA-DQB2P05538 RN7SKP95-201ENST00000362860 303 ntBASIC5.02□□□□□ -1.61
HLA-DQB2P05538 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQB2P05538 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms