Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC3□□□□□ -1.93
APOBP04114 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC3□□□□□ -1.93
APOBP04114 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
APOBP04114 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC3□□□□□ -1.93
APOBP04114 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC3□□□□□ -1.93
APOBP04114 RPL34P27-201ENST00000428810 349 ntBASIC3□□□□□ -1.93
APOBP04114 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3□□□□□ -1.93
APOBP04114 RPL7L1P8-201ENST00000469911 741 ntBASIC3□□□□□ -1.93
APOBP04114 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3□□□□□ -1.93
APOBP04114 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC3□□□□□ -1.93
APOBP04114 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3□□□□□ -1.93
APOBP04114 AL683813.2-201ENST00000605245 502 ntBASIC3□□□□□ -1.93
APOBP04114 AC039056.2-201ENST00000622261 511 ntBASIC3□□□□□ -1.93
APOBP04114 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3□□□□□ -1.93
APOBP04114 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3□□□□□ -1.93
APOBP04114 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
APOBP04114 AP005432.1-201ENST00000580891 3485 ntBASIC2.99□□□□□ -1.93
APOBP04114 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
APOBP04114 SMG1P6-201ENST00000532337 2930 ntBASIC2.99□□□□□ -1.93
APOBP04114 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC2.99□□□□□ -1.93
APOBP04114 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
APOBP04114 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
APOBP04114 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.99□□□□□ -1.93
APOBP04114 AL356387.2-201ENST00000422272 243 ntBASIC2.99□□□□□ -1.93
APOBP04114 BX276092.6-201ENST00000430476 250 ntBASIC2.99□□□□□ -1.93
APOBP04114 HSFY6P-201ENST00000445573 403 ntBASIC2.99□□□□□ -1.93
APOBP04114 BX276092.8-201ENST00000455722 250 ntBASIC2.99□□□□□ -1.93
APOBP04114 TRAV8-5-201ENST00000537369 341 ntBASIC2.99□□□□□ -1.93
APOBP04114 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
APOBP04114 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
APOBP04114 AL627171.1-201ENST00000618845 1308 ntBASIC2.99□□□□□ -1.93
APOBP04114 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
APOBP04114 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
APOBP04114 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
APOBP04114 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC2.99□□□□□ -1.93
APOBP04114 AC025031.4-201ENST00000621248 3271 ntBASIC2.99□□□□□ -1.93
APOBP04114 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
APOBP04114 OR5P1P-201ENST00000299512 925 ntBASIC2.99□□□□□ -1.93
APOBP04114 SNORA70.9-201ENST00000384370 135 ntBASIC2.99□□□□□ -1.93
APOBP04114 PPIAP31-201ENST00000405422 495 ntBASIC2.99□□□□□ -1.93
APOBP04114 TMSB10P2-201ENST00000416049 131 ntBASIC2.99□□□□□ -1.93
APOBP04114 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC2.99□□□□□ -1.93
APOBP04114 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC2.99□□□□□ -1.93
APOBP04114 UQCRHP4-201ENST00000471686 272 ntBASIC2.99□□□□□ -1.93
APOBP04114 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC2.99□□□□□ -1.93
APOBP04114 AC010547.7-201ENST00000570323 333 ntBASIC2.99□□□□□ -1.93
APOBP04114 MIR6133-201ENST00000617057 108 ntBASIC2.99□□□□□ -1.93
APOBP04114 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
APOBP04114 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
APOBP04114 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
APOBP04114 FSD2-201ENST00000334574 6418 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
APOBP04114 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC2.99□□□□□ -1.93
APOBP04114 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
APOBP04114 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
APOBP04114 AL359195.2-201ENST00000623657 4412 ntBASIC2.99□□□□□ -1.93
APOBP04114 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
APOBP04114 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
APOBP04114 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
APOBP04114 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
APOBP04114 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
APOBP04114 AL590762.2-201ENST00000395798 571 ntBASIC2.99□□□□□ -1.93
APOBP04114 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.99□□□□□ -1.93
APOBP04114 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC2.99□□□□□ -1.93
APOBP04114 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC2.99□□□□□ -1.93
APOBP04114 AF131215.7-201ENST00000602443 707 ntBASIC2.99□□□□□ -1.93
APOBP04114 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
APOBP04114 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC2.99□□□□□ -1.93
APOBP04114 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
APOBP04114 CEP350-202ENST00000367607 13491 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
APOBP04114 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC2.99□□□□□ -1.93
APOBP04114 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
APOBP04114 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC2.99□□□□□ -1.93
APOBP04114 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
APOBP04114 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.98□□□□□ -1.93
APOBP04114 AL356095.1-201ENST00000417217 199 ntBASIC2.98□□□□□ -1.93
APOBP04114 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC2.98□□□□□ -1.93
APOBP04114 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC2.98□□□□□ -1.93
APOBP04114 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.98□□□□□ -1.93
APOBP04114 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC2.98□□□□□ -1.93
APOBP04114 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC2.98□□□□□ -1.93
APOBP04114 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC2.98□□□□□ -1.93
APOBP04114 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC2.98□□□□□ -1.93
APOBP04114 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC2.98□□□□□ -1.93
APOBP04114 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC2.98□□□□□ -1.93
APOBP04114 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC2.98□□□□□ -1.93
APOBP04114 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 MYPN-205ENST00000613327 6116 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC2.98□□□□□ -1.93
APOBP04114 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 AC090017.1-201ENST00000548612 1779 ntBASIC2.98□□□□□ -1.93
APOBP04114 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC2.98□□□□□ -1.93
APOBP04114 AL162591.2-201ENST00000449634 317 ntBASIC2.98□□□□□ -1.93
APOBP04114 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms