Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
VTNP04004 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.59□□□□□ -1.52
VTNP04004 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.59□□□□□ -1.52
VTNP04004 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.52
VTNP04004 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VTNP04004 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
VTNP04004 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
VTNP04004 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VTNP04004 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VTNP04004 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.58□□□□□ -1.52
VTNP04004 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
VTNP04004 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VTNP04004 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
VTNP04004 AC132825.1-201ENST00000463573 2247 ntBASIC5.58□□□□□ -1.52
VTNP04004 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VTNP04004 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
VTNP04004 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
VTNP04004 GAPDHP15-201ENST00000398586 975 ntBASIC5.58□□□□□ -1.52
VTNP04004 AP002530.1-201ENST00000405705 684 ntBASIC5.58□□□□□ -1.52
VTNP04004 Y_RNA.625-201ENST00000411256 107 ntBASIC5.58□□□□□ -1.52
VTNP04004 AL158827.1-201ENST00000416300 391 ntBASIC5.58□□□□□ -1.52
VTNP04004 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.58□□□□□ -1.52
VTNP04004 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.58□□□□□ -1.52
VTNP04004 MTND2P40-201ENST00000436718 841 ntBASIC5.58□□□□□ -1.52
VTNP04004 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.58□□□□□ -1.52
VTNP04004 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.58□□□□□ -1.52
VTNP04004 AL354714.3-201ENST00000447284 493 ntBASIC5.58□□□□□ -1.52
VTNP04004 FCF1P7-201ENST00000451185 558 ntBASIC5.58□□□□□ -1.52
VTNP04004 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
VTNP04004 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.58□□□□□ -1.52
VTNP04004 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.58□□□□□ -1.52
VTNP04004 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.58□□□□□ -1.52
VTNP04004 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.58□□□□□ -1.52
VTNP04004 OOSP1P2-201ENST00000579644 351 ntBASIC5.58□□□□□ -1.52
VTNP04004 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.58□□□□□ -1.52
VTNP04004 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.58□□□□□ -1.52
VTNP04004 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.58□□□□□ -1.52
VTNP04004 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.58□□□□□ -1.52
VTNP04004 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.58□□□□□ -1.52
VTNP04004 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VTNP04004 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.58□□□□□ -1.52
VTNP04004 BX284613.1-201ENST00000452221 1641 ntBASIC5.58□□□□□ -1.52
VTNP04004 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VTNP04004 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.58□□□□□ -1.52
VTNP04004 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VTNP04004 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.58□□□□□ -1.52
VTNP04004 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VTNP04004 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VTNP04004 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VTNP04004 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.57□□□□□ -1.52
VTNP04004 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.57□□□□□ -1.52
VTNP04004 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.57□□□□□ -1.52
VTNP04004 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.57□□□□□ -1.52
VTNP04004 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.57□□□□□ -1.52
VTNP04004 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
VTNP04004 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
VTNP04004 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VTNP04004 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
VTNP04004 RNA5SP453-201ENST00000362503 119 ntBASIC5.57□□□□□ -1.52
VTNP04004 OR1L6-202ENST00000373684 1044 ntBASIC5.57□□□□□ -1.52
VTNP04004 SNORA2.3-201ENST00000383920 135 ntBASIC5.57□□□□□ -1.52
VTNP04004 AL390316.1-201ENST00000406279 553 ntBASIC5.57□□□□□ -1.52
VTNP04004 CASKP1-201ENST00000412870 582 ntBASIC5.57□□□□□ -1.52
VTNP04004 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VTNP04004 AL354868.1-201ENST00000417077 482 ntBASIC5.57□□□□□ -1.52
VTNP04004 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.57□□□□□ -1.52
VTNP04004 FABP7P2-201ENST00000429946 379 ntBASIC5.57□□□□□ -1.52
VTNP04004 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.57□□□□□ -1.52
VTNP04004 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
VTNP04004 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.57□□□□□ -1.52
VTNP04004 OR7E125P-201ENST00000443450 846 ntBASIC5.57□□□□□ -1.52
VTNP04004 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.57□□□□□ -1.52
VTNP04004 OR52A4P-203ENST00000498233 1014 ntBASIC5.57□□□□□ -1.52
VTNP04004 OR7H2P-201ENST00000513483 306 ntBASIC5.57□□□□□ -1.52
VTNP04004 RNU4-18P-201ENST00000516751 149 ntBASIC5.57□□□□□ -1.52
VTNP04004 MTND2P7-201ENST00000521337 640 ntBASIC5.57□□□□□ -1.52
VTNP04004 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.57□□□□□ -1.52
VTNP04004 EDDM3DP-201ENST00000554692 434 ntBASIC5.57□□□□□ -1.52
VTNP04004 AC234775.3-201ENST00000564612 656 ntBASIC5.57□□□□□ -1.52
VTNP04004 RN7SL290P-201ENST00000578661 300 ntBASIC5.57□□□□□ -1.52
VTNP04004 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.57□□□□□ -1.52
VTNP04004 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.57□□□□□ -1.52
VTNP04004 AC010615.3-201ENST00000597319 394 ntBASIC5.57□□□□□ -1.52
VTNP04004 MIR6820-201ENST00000611508 62 ntBASIC5.57□□□□□ -1.52
VTNP04004 AC107905.1-201ENST00000616204 426 ntBASIC5.57□□□□□ -1.52
VTNP04004 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.57□□□□□ -1.52
VTNP04004 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
VTNP04004 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
VTNP04004 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VTNP04004 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.57□□□□□ -1.52
VTNP04004 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.57□□□□□ -1.52
VTNP04004 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.57□□□□□ -1.52
VTNP04004 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.57□□□□□ -1.52
VTNP04004 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VTNP04004 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.57□□□□□ -1.52
VTNP04004 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.57□□□□□ -1.52
VTNP04004 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VTNP04004 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VTNP04004 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VTNP04004 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms