Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC017019.1-201ENST00000426129 261 ntBASIC5.64□□□□□ -1.51
CHRNA1P02708 VTI1BP4-201ENST00000427516 527 ntBASIC5.64□□□□□ -1.51
CHRNA1P02708 NPM1P48-201ENST00000436002 853 ntBASIC5.64□□□□□ -1.51
CHRNA1P02708 RPL12P18-201ENST00000437175 325 ntBASIC5.64□□□□□ -1.51
CHRNA1P02708 RPL7P41-201ENST00000485823 957 ntBASIC5.64□□□□□ -1.51
CHRNA1P02708 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.64□□□□□ -1.51
CHRNA1P02708 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.64□□□□□ -1.51
CHRNA1P02708 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.64□□□□□ -1.51
CHRNA1P02708 EIF4EP5-201ENST00000528228 640 ntBASIC5.64□□□□□ -1.51
CHRNA1P02708 GCSHP4-201ENST00000538792 439 ntBASIC5.64□□□□□ -1.51
CHRNA1P02708 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.64□□□□□ -1.51
CHRNA1P02708 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.64□□□□□ -1.51
CHRNA1P02708 AC011626.1-201ENST00000604710 562 ntBASIC5.64□□□□□ -1.51
CHRNA1P02708 AP005432.2-201ENST00000608162 586 ntBASIC5.64□□□□□ -1.51
CHRNA1P02708 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.64□□□□□ -1.51
CHRNA1P02708 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.64□□□□□ -1.51
CHRNA1P02708 AL122125.1-201ENST00000616999 600 ntBASIC5.64□□□□□ -1.51
CHRNA1P02708 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNA1P02708 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.64□□□□□ -1.51
CHRNA1P02708 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CHRNA1P02708 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.64□□□□□ -1.51
CHRNA1P02708 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNA1P02708 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.64□□□□□ -1.51
CHRNA1P02708 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CHRNA1P02708 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNA1P02708 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CHRNA1P02708 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
CHRNA1P02708 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.63□□□□□ -1.51
CHRNA1P02708 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CHRNA1P02708 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CHRNA1P02708 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.63□□□□□ -1.51
CHRNA1P02708 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CHRNA1P02708 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CHRNA1P02708 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.63□□□□□ -1.51
CHRNA1P02708 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.63□□□□□ -1.51
CHRNA1P02708 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CHRNA1P02708 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.63□□□□□ -1.51
CHRNA1P02708 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CHRNA1P02708 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CHRNA1P02708 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CHRNA1P02708 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.63□□□□□ -1.51
CHRNA1P02708 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CHRNA1P02708 RNU1-74P-201ENST00000384108 171 ntBASIC5.63□□□□□ -1.51
CHRNA1P02708 FAR2P2-201ENST00000413041 594 ntBASIC5.63□□□□□ -1.51
CHRNA1P02708 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.63□□□□□ -1.51
CHRNA1P02708 FAR2P4-202ENST00000425399 584 ntBASIC5.63□□□□□ -1.51
CHRNA1P02708 HMGB1P32-201ENST00000425971 565 ntBASIC5.63□□□□□ -1.51
CHRNA1P02708 AL161722.2-201ENST00000434731 981 ntBASIC5.63□□□□□ -1.51
CHRNA1P02708 PRPF38AP2-201ENST00000438179 851 ntBASIC5.63□□□□□ -1.51
CHRNA1P02708 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.63□□□□□ -1.51
CHRNA1P02708 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.63□□□□□ -1.51
CHRNA1P02708 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.63□□□□□ -1.51
CHRNA1P02708 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.63□□□□□ -1.51
CHRNA1P02708 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.63□□□□□ -1.51
CHRNA1P02708 GLUD1P3-202ENST00000508551 200 ntBASIC5.63□□□□□ -1.51
CHRNA1P02708 RNA5SP43-201ENST00000516559 110 ntBASIC5.63□□□□□ -1.51
CHRNA1P02708 AC022616.2-201ENST00000523185 300 ntBASIC5.63□□□□□ -1.51
CHRNA1P02708 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.63□□□□□ -1.51
CHRNA1P02708 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CHRNA1P02708 GSTP1P1-201ENST00000548078 319 ntBASIC5.63□□□□□ -1.51
CHRNA1P02708 AC063949.1-201ENST00000552900 865 ntBASIC5.63□□□□□ -1.51
CHRNA1P02708 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.63□□□□□ -1.51
CHRNA1P02708 MIR6810-201ENST00000622701 70 ntBASIC5.63□□□□□ -1.51
CHRNA1P02708 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.63□□□□□ -1.51
CHRNA1P02708 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CHRNA1P02708 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CHRNA1P02708 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CHRNA1P02708 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CHRNA1P02708 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.63□□□□□ -1.51
CHRNA1P02708 AL121839.2-201ENST00000565058 6943 ntBASIC5.62□□□□□ -1.51
CHRNA1P02708 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHRNA1P02708 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHRNA1P02708 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHRNA1P02708 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHRNA1P02708 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHRNA1P02708 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CHRNA1P02708 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CHRNA1P02708 MIR589-201ENST00000385238 99 ntBASIC5.62□□□□□ -1.51
CHRNA1P02708 GAPDHP15-201ENST00000398586 975 ntBASIC5.62□□□□□ -1.51
CHRNA1P02708 AP002530.1-201ENST00000405705 684 ntBASIC5.62□□□□□ -1.51
CHRNA1P02708 AL158827.1-201ENST00000416300 391 ntBASIC5.62□□□□□ -1.51
CHRNA1P02708 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.62□□□□□ -1.51
CHRNA1P02708 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.62□□□□□ -1.51
CHRNA1P02708 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.62□□□□□ -1.51
CHRNA1P02708 AC112498.1-201ENST00000444401 332 ntBASIC5.62□□□□□ -1.51
CHRNA1P02708 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.62□□□□□ -1.51
CHRNA1P02708 AC009220.1-201ENST00000451614 275 ntBASIC5.62□□□□□ -1.51
CHRNA1P02708 RN7SL189P-201ENST00000468631 289 ntBASIC5.62□□□□□ -1.51
CHRNA1P02708 AC020779.1-201ENST00000478757 796 ntBASIC5.62□□□□□ -1.51
CHRNA1P02708 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CHRNA1P02708 AC093890.1-201ENST00000502554 540 ntBASIC5.62□□□□□ -1.51
CHRNA1P02708 MRPS33P2-201ENST00000507850 322 ntBASIC5.62□□□□□ -1.51
CHRNA1P02708 AC022360.1-201ENST00000521058 340 ntBASIC5.62□□□□□ -1.51
CHRNA1P02708 OR8Q1P-201ENST00000526467 655 ntBASIC5.62□□□□□ -1.51
CHRNA1P02708 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.62□□□□□ -1.51
CHRNA1P02708 MIR4737-201ENST00000583979 81 ntBASIC5.62□□□□□ -1.51
CHRNA1P02708 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.62□□□□□ -1.51
CHRNA1P02708 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHRNA1P02708 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.62□□□□□ -1.51
CHRNA1P02708 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms