Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.93□□□□□ -1.46
COL4A1P02462 AP001781.1-201ENST00000530977 207 ntBASIC5.93□□□□□ -1.46
COL4A1P02462 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.93□□□□□ -1.46
COL4A1P02462 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.93□□□□□ -1.46
COL4A1P02462 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.93□□□□□ -1.46
COL4A1P02462 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.93□□□□□ -1.46
COL4A1P02462 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.93□□□□□ -1.46
COL4A1P02462 AC069366.1-201ENST00000583159 838 ntBASIC5.93□□□□□ -1.46
COL4A1P02462 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.93□□□□□ -1.46
COL4A1P02462 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.93□□□□□ -1.46
COL4A1P02462 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.93□□□□□ -1.46
COL4A1P02462 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.93□□□□□ -1.46
COL4A1P02462 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
COL4A1P02462 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A1P02462 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A1P02462 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.93□□□□□ -1.46
COL4A1P02462 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.93□□□□□ -1.46
COL4A1P02462 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
COL4A1P02462 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.92□□□□□ -1.46
COL4A1P02462 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
COL4A1P02462 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL4A1P02462 SNORA62-201ENST00000365493 153 ntBASIC5.92□□□□□ -1.46
COL4A1P02462 AC009480.2-201ENST00000422916 432 ntBASIC5.92□□□□□ -1.46
COL4A1P02462 MRPS21P2-201ENST00000424704 264 ntBASIC5.92□□□□□ -1.46
COL4A1P02462 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.92□□□□□ -1.46
COL4A1P02462 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.92□□□□□ -1.46
COL4A1P02462 COX6CP13-201ENST00000428703 226 ntBASIC5.92□□□□□ -1.46
COL4A1P02462 AC016831.4-201ENST00000438302 307 ntBASIC5.92□□□□□ -1.46
COL4A1P02462 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.92□□□□□ -1.46
COL4A1P02462 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
COL4A1P02462 RPS5P7-201ENST00000456664 608 ntBASIC5.92□□□□□ -1.46
COL4A1P02462 snoU13.1-201ENST00000459157 104 ntBASIC5.92□□□□□ -1.46
COL4A1P02462 AC103987.1-201ENST00000473394 348 ntBASIC5.92□□□□□ -1.46
COL4A1P02462 AC073358.1-201ENST00000505671 684 ntBASIC5.92□□□□□ -1.46
COL4A1P02462 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.92□□□□□ -1.46
COL4A1P02462 SUMO2P19-201ENST00000518920 295 ntBASIC5.92□□□□□ -1.46
COL4A1P02462 GTF2IP11-201ENST00000526931 420 ntBASIC5.92□□□□□ -1.46
COL4A1P02462 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.92□□□□□ -1.46
COL4A1P02462 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.92□□□□□ -1.46
COL4A1P02462 AC133555.2-201ENST00000550213 292 ntBASIC5.92□□□□□ -1.46
COL4A1P02462 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.92□□□□□ -1.46
COL4A1P02462 KPNA2P3-201ENST00000584190 848 ntBASIC5.92□□□□□ -1.46
COL4A1P02462 AC011447.7-201ENST00000624228 1590 ntBASIC5.92□□□□□ -1.46
COL4A1P02462 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
COL4A1P02462 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL4A1P02462 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL4A1P02462 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL4A1P02462 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL4A1P02462 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL4A1P02462 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL4A1P02462 AC133552.1-201ENST00000569988 4007 ntBASIC5.92□□□□□ -1.46
COL4A1P02462 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL4A1P02462 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
COL4A1P02462 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
COL4A1P02462 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL4A1P02462 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.92□□□□□ -1.46
COL4A1P02462 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.92□□□□□ -1.46
COL4A1P02462 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL4A1P02462 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.92□□□□□ -1.46
COL4A1P02462 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
COL4A1P02462 RPL7P57-201ENST00000423238 740 ntBASIC5.91□□□□□ -1.46
COL4A1P02462 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.91□□□□□ -1.46
COL4A1P02462 ARL2BPP10-201ENST00000446487 531 ntBASIC5.91□□□□□ -1.46
COL4A1P02462 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.91□□□□□ -1.46
COL4A1P02462 AL161722.1-201ENST00000446972 1032 ntBASIC5.91□□□□□ -1.46
COL4A1P02462 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.91□□□□□ -1.46
COL4A1P02462 RPL7AP28-201ENST00000464513 571 ntBASIC5.91□□□□□ -1.46
COL4A1P02462 OR11I1P-201ENST00000486033 954 ntBASIC5.91□□□□□ -1.46
COL4A1P02462 AC136624.4-201ENST00000573044 370 ntBASIC5.91□□□□□ -1.46
COL4A1P02462 AP005119.2-201ENST00000579735 1105 ntBASIC5.91□□□□□ -1.46
COL4A1P02462 AC115286.1-201ENST00000604298 434 ntBASIC5.91□□□□□ -1.46
COL4A1P02462 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL4A1P02462 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL4A1P02462 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL4A1P02462 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL4A1P02462 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.91□□□□□ -1.46
COL4A1P02462 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.91□□□□□ -1.46
COL4A1P02462 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL4A1P02462 ABCC13-202ENST00000463099 3842 ntBASIC5.91□□□□□ -1.46
COL4A1P02462 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.91□□□□□ -1.46
COL4A1P02462 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.91□□□□□ -1.46
COL4A1P02462 AC007159.1-201ENST00000566529 4706 ntBASIC5.91□□□□□ -1.46
COL4A1P02462 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL4A1P02462 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL4A1P02462 SNORA70.2-201ENST00000364506 135 ntBASIC5.91□□□□□ -1.46
COL4A1P02462 AL136455.1-201ENST00000441083 1240 ntBASIC5.91□□□□□ -1.46
COL4A1P02462 RPL36AP41-201ENST00000493820 306 ntBASIC5.91□□□□□ -1.46
COL4A1P02462 IGBP1P5-201ENST00000507524 1000 ntBASIC5.91□□□□□ -1.46
COL4A1P02462 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
COL4A1P02462 BUD31P1-201ENST00000521828 359 ntBASIC5.91□□□□□ -1.46
COL4A1P02462 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.91□□□□□ -1.46
COL4A1P02462 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.91□□□□□ -1.46
COL4A1P02462 AL590392.1-201ENST00000604960 446 ntBASIC5.91□□□□□ -1.46
COL4A1P02462 MLECP1-201ENST00000615893 709 ntBASIC5.91□□□□□ -1.46
COL4A1P02462 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL4A1P02462 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
COL4A1P02462 RBPJP2-201ENST00000618187 1444 ntBASIC5.9□□□□□ -1.46
COL4A1P02462 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL4A1P02462 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL4A1P02462 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms