Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.88□□□□□ -1.63
SCN2BO60939 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SCN2BO60939 AC122134.1-201ENST00000565664 1104 ntBASIC4.88□□□□□ -1.63
SCN2BO60939 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.88□□□□□ -1.63
SCN2BO60939 AC020978.7-201ENST00000575953 1187 ntBASIC4.88□□□□□ -1.63
SCN2BO60939 MIR4675-201ENST00000577898 77 ntBASIC4.88□□□□□ -1.63
SCN2BO60939 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.88□□□□□ -1.63
SCN2BO60939 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.88□□□□□ -1.63
SCN2BO60939 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.88□□□□□ -1.63
SCN2BO60939 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.88□□□□□ -1.63
SCN2BO60939 AC004477.3-201ENST00000614061 590 ntBASIC4.88□□□□□ -1.63
SCN2BO60939 AC007204.2-201ENST00000615022 616 ntBASIC4.88□□□□□ -1.63
SCN2BO60939 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.88□□□□□ -1.63
SCN2BO60939 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SCN2BO60939 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SCN2BO60939 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.88□□□□□ -1.63
SCN2BO60939 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SCN2BO60939 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
SCN2BO60939 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SCN2BO60939 SMG1P4-204ENST00000523028 4131 ntBASIC4.88□□□□□ -1.63
SCN2BO60939 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SCN2BO60939 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.88□□□□□ -1.63
SCN2BO60939 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.88□□□□□ -1.63
SCN2BO60939 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SCN2BO60939 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SCN2BO60939 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SCN2BO60939 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SCN2BO60939 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.87□□□□□ -1.63
SCN2BO60939 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SCN2BO60939 AC107021.2-201ENST00000567714 2095 ntBASIC4.87□□□□□ -1.63
SCN2BO60939 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SCN2BO60939 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SCN2BO60939 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SCN2BO60939 KARSP1-201ENST00000451871 1752 ntBASIC4.87□□□□□ -1.63
SCN2BO60939 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SCN2BO60939 RNA5SP183-201ENST00000362452 119 ntBASIC4.87□□□□□ -1.63
SCN2BO60939 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.87□□□□□ -1.63
SCN2BO60939 AL035079.1-201ENST00000405210 287 ntBASIC4.87□□□□□ -1.63
SCN2BO60939 MIR1182-201ENST00000408363 97 ntBASIC4.87□□□□□ -1.63
SCN2BO60939 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.87□□□□□ -1.63
SCN2BO60939 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.87□□□□□ -1.63
SCN2BO60939 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.87□□□□□ -1.63
SCN2BO60939 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.87□□□□□ -1.63
SCN2BO60939 RPL12P11-201ENST00000439970 501 ntBASIC4.87□□□□□ -1.63
SCN2BO60939 AL591363.1-201ENST00000450091 483 ntBASIC4.87□□□□□ -1.63
SCN2BO60939 RBMY2TP-201ENST00000451162 947 ntBASIC4.87□□□□□ -1.63
SCN2BO60939 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.87□□□□□ -1.63
SCN2BO60939 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.87□□□□□ -1.63
SCN2BO60939 AL133445.1-201ENST00000467051 452 ntBASIC4.87□□□□□ -1.63
SCN2BO60939 AC073073.1-201ENST00000493920 463 ntBASIC4.87□□□□□ -1.63
SCN2BO60939 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.87□□□□□ -1.63
SCN2BO60939 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.87□□□□□ -1.63
SCN2BO60939 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.87□□□□□ -1.63
SCN2BO60939 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.87□□□□□ -1.63
SCN2BO60939 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.87□□□□□ -1.63
SCN2BO60939 AC018552.1-201ENST00000562099 811 ntBASIC4.87□□□□□ -1.63
SCN2BO60939 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SCN2BO60939 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.87□□□□□ -1.63
SCN2BO60939 AL356752.1-201ENST00000615844 593 ntBASIC4.87□□□□□ -1.63
SCN2BO60939 AL158062.1-201ENST00000619632 745 ntBASIC4.87□□□□□ -1.63
SCN2BO60939 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.87□□□□□ -1.63
SCN2BO60939 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.87□□□□□ -1.63
SCN2BO60939 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SCN2BO60939 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SCN2BO60939 BTBD10P1-201ENST00000549824 1352 ntBASIC4.87□□□□□ -1.63
SCN2BO60939 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SCN2BO60939 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SCN2BO60939 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.87□□□□□ -1.63
SCN2BO60939 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SCN2BO60939 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SCN2BO60939 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.87□□□□□ -1.63
SCN2BO60939 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SCN2BO60939 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SCN2BO60939 AC000374.1-201ENST00000434698 1745 ntBASIC4.86□□□□□ -1.63
SCN2BO60939 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
SCN2BO60939 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SCN2BO60939 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SCN2BO60939 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SCN2BO60939 RNU6-1320P-201ENST00000390838 107 ntBASIC4.86□□□□□ -1.63
SCN2BO60939 RNU1-149P-201ENST00000390870 161 ntBASIC4.86□□□□□ -1.63
SCN2BO60939 RNU6-1269P-201ENST00000391139 107 ntBASIC4.86□□□□□ -1.63
SCN2BO60939 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.86□□□□□ -1.63
SCN2BO60939 AL133325.1-201ENST00000421090 382 ntBASIC4.86□□□□□ -1.63
SCN2BO60939 COX6CP13-201ENST00000428703 226 ntBASIC4.86□□□□□ -1.63
SCN2BO60939 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.86□□□□□ -1.63
SCN2BO60939 RPL35AP21-201ENST00000437667 333 ntBASIC4.86□□□□□ -1.63
SCN2BO60939 RPS11P7-201ENST00000442125 465 ntBASIC4.86□□□□□ -1.63
SCN2BO60939 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.86□□□□□ -1.63
SCN2BO60939 RNU6-599P-201ENST00000459383 107 ntBASIC4.86□□□□□ -1.63
SCN2BO60939 RNU6-1193P-201ENST00000459461 107 ntBASIC4.86□□□□□ -1.63
SCN2BO60939 RPSAP39-201ENST00000467439 883 ntBASIC4.86□□□□□ -1.63
SCN2BO60939 AC020779.1-201ENST00000478757 796 ntBASIC4.86□□□□□ -1.63
SCN2BO60939 RPL5P22-201ENST00000480199 884 ntBASIC4.86□□□□□ -1.63
SCN2BO60939 RPL7P51-201ENST00000490532 749 ntBASIC4.86□□□□□ -1.63
SCN2BO60939 RPS4XP20-201ENST00000505751 772 ntBASIC4.86□□□□□ -1.63
SCN2BO60939 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.86□□□□□ -1.63
SCN2BO60939 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.86□□□□□ -1.63
SCN2BO60939 RNU6-943P-201ENST00000516960 98 ntBASIC4.86□□□□□ -1.63
SCN2BO60939 AC012400.1-201ENST00000518452 381 ntBASIC4.86□□□□□ -1.63
SCN2BO60939 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms