Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SMAD6O43541 AP001960.1-201ENST00000506494 658 ntBASIC5.49□□□□□ -1.53
SMAD6O43541 HMGB1P40-201ENST00000525121 540 ntBASIC5.49□□□□□ -1.53
SMAD6O43541 AC134349.2-201ENST00000535136 910 ntBASIC5.49□□□□□ -1.53
SMAD6O43541 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SMAD6O43541 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.49□□□□□ -1.53
SMAD6O43541 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.49□□□□□ -1.53
SMAD6O43541 AL049779.2-201ENST00000553847 315 ntBASIC5.49□□□□□ -1.53
SMAD6O43541 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.49□□□□□ -1.53
SMAD6O43541 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.49□□□□□ -1.53
SMAD6O43541 NPM1P45-201ENST00000583151 559 ntBASIC5.49□□□□□ -1.53
SMAD6O43541 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.49□□□□□ -1.53
SMAD6O43541 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.49□□□□□ -1.53
SMAD6O43541 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.49□□□□□ -1.53
SMAD6O43541 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.49□□□□□ -1.53
SMAD6O43541 AC008115.4-201ENST00000619780 775 ntBASIC5.49□□□□□ -1.53
SMAD6O43541 AC079776.5-201ENST00000641920 211 ntBASIC5.49□□□□□ -1.53
SMAD6O43541 SAMM50P1-201ENST00000455403 1399 ntBASIC5.49□□□□□ -1.53
SMAD6O43541 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SMAD6O43541 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.49□□□□□ -1.53
SMAD6O43541 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SMAD6O43541 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
SMAD6O43541 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SMAD6O43541 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SMAD6O43541 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SMAD6O43541 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.48□□□□□ -1.53
SMAD6O43541 AL513548.1-201ENST00000562904 1724 ntBASIC5.48□□□□□ -1.53
SMAD6O43541 AL359715.3-201ENST00000569267 2123 ntBASIC5.48□□□□□ -1.53
SMAD6O43541 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SMAD6O43541 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SMAD6O43541 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.48□□□□□ -1.53
SMAD6O43541 C4BPAP1-201ENST00000415474 1893 ntBASIC5.48□□□□□ -1.53
SMAD6O43541 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SMAD6O43541 U3.7-201ENST00000363668 216 ntBASIC5.48□□□□□ -1.53
SMAD6O43541 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SMAD6O43541 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.48□□□□□ -1.53
SMAD6O43541 AP000534.2-201ENST00000412729 568 ntBASIC5.48□□□□□ -1.53
SMAD6O43541 SLC35E1P1-201ENST00000419313 864 ntBASIC5.48□□□□□ -1.53
SMAD6O43541 AC009506.2-201ENST00000420635 840 ntBASIC5.48□□□□□ -1.53
SMAD6O43541 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.48□□□□□ -1.53
SMAD6O43541 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.48□□□□□ -1.53
SMAD6O43541 NANOGP4-201ENST00000427230 913 ntBASIC5.48□□□□□ -1.53
SMAD6O43541 AC114973.1-201ENST00000429057 632 ntBASIC5.48□□□□□ -1.53
SMAD6O43541 FAM96AP1-201ENST00000430879 482 ntBASIC5.48□□□□□ -1.53
SMAD6O43541 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.48□□□□□ -1.53
SMAD6O43541 OR52B5P-201ENST00000435337 951 ntBASIC5.48□□□□□ -1.53
SMAD6O43541 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.48□□□□□ -1.53
SMAD6O43541 AL163193.1-201ENST00000444895 788 ntBASIC5.48□□□□□ -1.53
SMAD6O43541 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.48□□□□□ -1.53
SMAD6O43541 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.48□□□□□ -1.53
SMAD6O43541 AC092754.1-201ENST00000472975 479 ntBASIC5.48□□□□□ -1.53
SMAD6O43541 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.48□□□□□ -1.53
SMAD6O43541 RPS21P4-201ENST00000487122 248 ntBASIC5.48□□□□□ -1.53
SMAD6O43541 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.48□□□□□ -1.53
SMAD6O43541 RN7SL447P-201ENST00000494711 245 ntBASIC5.48□□□□□ -1.53
SMAD6O43541 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.48□□□□□ -1.53
SMAD6O43541 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.48□□□□□ -1.53
SMAD6O43541 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.48□□□□□ -1.53
SMAD6O43541 RNU6-943P-201ENST00000516960 98 ntBASIC5.48□□□□□ -1.53
SMAD6O43541 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.48□□□□□ -1.53
SMAD6O43541 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.48□□□□□ -1.53
SMAD6O43541 AC139103.1-201ENST00000534696 1030 ntBASIC5.48□□□□□ -1.53
SMAD6O43541 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.48□□□□□ -1.53
SMAD6O43541 MTND3P12-201ENST00000559068 328 ntBASIC5.48□□□□□ -1.53
SMAD6O43541 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.48□□□□□ -1.53
SMAD6O43541 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC5.48□□□□□ -1.53
SMAD6O43541 RN7SL339P-201ENST00000580597 296 ntBASIC5.48□□□□□ -1.53
SMAD6O43541 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.48□□□□□ -1.53
SMAD6O43541 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.48□□□□□ -1.53
SMAD6O43541 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.48□□□□□ -1.53
SMAD6O43541 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
SMAD6O43541 OR7E18P-201ENST00000592589 702 ntBASIC5.48□□□□□ -1.53
SMAD6O43541 AC005776.1-201ENST00000603164 290 ntBASIC5.48□□□□□ -1.53
SMAD6O43541 AC120053.1-201ENST00000607706 736 ntBASIC5.48□□□□□ -1.53
SMAD6O43541 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.48□□□□□ -1.53
SMAD6O43541 AL356752.1-201ENST00000615844 593 ntBASIC5.48□□□□□ -1.53
SMAD6O43541 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.48□□□□□ -1.53
SMAD6O43541 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SMAD6O43541 OR52B5P-202ENST00000641118 1110 ntBASIC5.48□□□□□ -1.53
SMAD6O43541 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
SMAD6O43541 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SMAD6O43541 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SMAD6O43541 AL590763.1-201ENST00000398297 1545 ntBASIC5.48□□□□□ -1.53
SMAD6O43541 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SMAD6O43541 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
SMAD6O43541 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SMAD6O43541 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
SMAD6O43541 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.48□□□□□ -1.53
SMAD6O43541 AC097461.1-201ENST00000568928 2821 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SMAD6O43541 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SMAD6O43541 AC114774.1-201ENST00000507410 1770 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SMAD6O43541 AL078621.3-201ENST00000623707 2042 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 AC015799.1-201ENST00000622996 3122 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 AC079097.1-201ENST00000512187 1399 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SMAD6O43541 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SMAD6O43541 SNORD56.6-201ENST00000384569 71 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 U3.28-201ENST00000391249 210 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms