Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 ARL6IP1P3-201ENST00000524544 560 ntBASIC8.72□□□□□ -1.01
CUX2O14529 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC8.72□□□□□ -1.01
CUX2O14529 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC8.72□□□□□ -1.01
CUX2O14529 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC8.72□□□□□ -1.01
CUX2O14529 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC8.72□□□□□ -1.01
CUX2O14529 AL160281.1-201ENST00000605307 311 ntBASIC8.72□□□□□ -1.01
CUX2O14529 AL445567.2-201ENST00000618935 498 ntBASIC8.72□□□□□ -1.01
CUX2O14529 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CUX2O14529 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC8.72□□□□□ -1.01
CUX2O14529 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC8.72□□□□□ -1.01
CUX2O14529 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CUX2O14529 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC8.72□□□□□ -1.01
CUX2O14529 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CUX2O14529 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
CUX2O14529 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CUX2O14529 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CUX2O14529 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
CUX2O14529 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
CUX2O14529 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.01
CUX2O14529 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
CUX2O14529 AL021331.1-201ENST00000402817 582 ntBASIC8.71□□□□□ -1.01
CUX2O14529 AC233289.1-201ENST00000403700 508 ntBASIC8.71□□□□□ -1.01
CUX2O14529 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC8.71□□□□□ -1.01
CUX2O14529 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC8.71□□□□□ -1.01
CUX2O14529 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC8.71□□□□□ -1.01
CUX2O14529 MRPL49P2-201ENST00000521066 465 ntBASIC8.71□□□□□ -1.01
CUX2O14529 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC8.71□□□□□ -1.01
CUX2O14529 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC8.71□□□□□ -1.01
CUX2O14529 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
CUX2O14529 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC8.71□□□□□ -1.01
CUX2O14529 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
CUX2O14529 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
CUX2O14529 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
CUX2O14529 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CUX2O14529 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
CUX2O14529 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CUX2O14529 RNA5SP90-201ENST00000364801 99 ntBASIC8.7□□□□□ -1.02
CUX2O14529 SNORA62.3-201ENST00000365110 153 ntBASIC8.7□□□□□ -1.02
CUX2O14529 MIR554-201ENST00000384874 96 ntBASIC8.7□□□□□ -1.02
CUX2O14529 RNA5SP397-201ENST00000391323 118 ntBASIC8.7□□□□□ -1.02
CUX2O14529 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC8.7□□□□□ -1.02
CUX2O14529 SUMO2P19-201ENST00000518920 295 ntBASIC8.7□□□□□ -1.02
CUX2O14529 AL352984.2-202ENST00000613699 155 ntBASIC8.7□□□□□ -1.02
CUX2O14529 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
CUX2O14529 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC8.7□□□□□ -1.02
CUX2O14529 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CUX2O14529 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
CUX2O14529 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC8.7□□□□□ -1.02
CUX2O14529 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC8.7□□□□□ -1.02
CUX2O14529 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CUX2O14529 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CUX2O14529 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
CUX2O14529 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CUX2O14529 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC8.7□□□□□ -1.02
CUX2O14529 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CUX2O14529 AL607077.1-201ENST00000401718 499 ntBASIC8.7□□□□□ -1.02
CUX2O14529 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC8.7□□□□□ -1.02
CUX2O14529 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC8.7□□□□□ -1.02
CUX2O14529 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC8.7□□□□□ -1.02
CUX2O14529 SLC25A18P1-201ENST00000449385 454 ntBASIC8.7□□□□□ -1.02
CUX2O14529 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC8.7□□□□□ -1.02
CUX2O14529 AC007016.1-201ENST00000512110 244 ntBASIC8.7□□□□□ -1.02
CUX2O14529 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC8.7□□□□□ -1.02
CUX2O14529 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC8.7□□□□□ -1.02
CUX2O14529 AF131215.7-201ENST00000602443 707 ntBASIC8.7□□□□□ -1.02
CUX2O14529 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC8.7□□□□□ -1.02
CUX2O14529 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CUX2O14529 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CUX2O14529 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CUX2O14529 AL158152.1-201ENST00000602652 1435 ntBASIC8.69□□□□□ -1.02
CUX2O14529 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC8.69□□□□□ -1.02
CUX2O14529 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC8.69□□□□□ -1.02
CUX2O14529 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CUX2O14529 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
CUX2O14529 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CUX2O14529 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
CUX2O14529 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CUX2O14529 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CUX2O14529 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CUX2O14529 RMST-209ENST00000639542 3269 ntTSL 5 BASIC8.69□□□□□ -1.02
CUX2O14529 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
CUX2O14529 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CUX2O14529 SNORA63.1-201ENST00000362493 131 ntBASIC8.69□□□□□ -1.02
CUX2O14529 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CUX2O14529 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC8.69□□□□□ -1.02
CUX2O14529 GTF2IP5-201ENST00000414608 731 ntBASIC8.69□□□□□ -1.02
CUX2O14529 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC8.69□□□□□ -1.02
CUX2O14529 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC8.69□□□□□ -1.02
CUX2O14529 RRM2P4-201ENST00000441721 562 ntBASIC8.69□□□□□ -1.02
CUX2O14529 SCARNA22-201ENST00000503991 125 ntBASIC8.69□□□□□ -1.02
CUX2O14529 AC106806.2-201ENST00000509365 500 ntBASIC8.69□□□□□ -1.02
CUX2O14529 GAPDHP62-201ENST00000515313 990 ntBASIC8.69□□□□□ -1.02
CUX2O14529 AC023632.4-201ENST00000517783 191 ntBASIC8.69□□□□□ -1.02
CUX2O14529 OR4A43P-201ENST00000532938 908 ntBASIC8.69□□□□□ -1.02
CUX2O14529 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC8.69□□□□□ -1.02
CUX2O14529 AC099676.1-201ENST00000608886 657 ntBASIC8.69□□□□□ -1.02
CUX2O14529 CR381572.2-201ENST00000624852 397 ntBASIC8.69□□□□□ -1.02
CUX2O14529 AC032011.1-201ENST00000611703 1549 ntBASIC8.69□□□□□ -1.02
CUX2O14529 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC8.69□□□□□ -1.02
CUX2O14529 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC8.69□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms