Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC019084.1-201ENST00000457337 432 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AC092754.1-201ENST00000472975 479 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 CR383656.1-201ENST00000484916 377 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AC058823.1-201ENST00000485315 474 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 RPS12P31-201ENST00000491419 398 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AC138866.2-201ENST00000508650 584 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 MTND6P2-201ENST00000512226 524 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AP001804.2-201ENST00000533932 910 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AC084759.1-201ENST00000561168 290 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AC005034.4-201ENST00000603612 899 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AC067838.1-201ENST00000606064 577 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AL022394.1-201ENST00000606979 292 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 RNU6-84P-201ENST00000607737 102 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AP003400.3-201ENST00000624904 346 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AC008993.2-201ENST00000631744 806 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AC073136.1-201ENST00000449426 2884 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AC078880.4-201ENST00000617627 1749 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 NPM1P37-201ENST00000403105 874 ntBASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 TATDN1P1-201ENST00000414123 891 ntBASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 BX664727.1-201ENST00000416024 466 ntBASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 AL160175.1-201ENST00000428124 247 ntBASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 NOP56P2-201ENST00000447491 769 ntBASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 AC108161.1-201ENST00000461060 402 ntBASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 AC008379.1-201ENST00000463655 464 ntBASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 LARP7P4-201ENST00000481075 878 ntBASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 AC112518.2-201ENST00000508565 425 ntBASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 RNA5SP230-201ENST00000517039 122 ntBASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 CYCSP22-201ENST00000517555 339 ntBASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 AP003066.2-201ENST00000529375 555 ntBASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 AC107958.1-201ENST00000556576 290 ntBASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 AGGF1P9-201ENST00000561884 913 ntBASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 AC124283.4-201ENST00000581815 456 ntBASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 MIR4271-201ENST00000582451 67 ntBASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 MIR4660-201ENST00000583549 74 ntBASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 MTCO2P22-201ENST00000603246 681 ntBASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 AC100767.2-201ENST00000604840 693 ntBASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 AP005229.2-201ENST00000609980 697 ntBASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 AL096712.1-201ENST00000614561 159 ntBASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 AL359715.4-201ENST00000606629 1436 ntBASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 KARSP1-201ENST00000451871 1752 ntBASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
TCRBV7S3A2A0A539 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
TCRBV7S3A2A0A539 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
TCRBV7S3A2A0A539 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
TCRBV7S3A2A0A539 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 AC015689.2-201ENST00000528172 1738 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms