Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 AL449283.1-201ENST00000602631 3403 ntBASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 AC020633.1-201ENST00000468439 2247 ntBASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 AL391987.1-201ENST00000441025 200 ntBASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 AL136455.1-201ENST00000441083 1240 ntBASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 FAR2P1-206ENST00000449736 709 ntBASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 RPS21P4-201ENST00000487122 248 ntBASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 RPS26P24-201ENST00000497656 331 ntBASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 IGKV2-18-201ENST00000522607 343 ntBASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 OR11J2P-201ENST00000555298 907 ntBASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 AC099494.2-201ENST00000623371 978 ntBASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.49□□□□□ -1.69
TRAV27A0A087WT01 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 AC107068.1-201ENST00000563286 4218 ntBASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 MTCO1P7-201ENST00000419523 1542 ntBASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 SNORA66-201ENST00000384792 133 ntBASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 RPL36AP10-201ENST00000421785 322 ntBASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 SCAND3P1-201ENST00000439854 1060 ntBASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 RN7SKP260-201ENST00000516907 149 ntBASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 IGKV3D-34-201ENST00000522638 302 ntBASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 OR8A2P-201ENST00000528631 952 ntBASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 RN7SL435P-201ENST00000584418 282 ntBASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 AC104687.2-201ENST00000604442 342 ntBASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 AC008115.4-201ENST00000619780 775 ntBASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRAV27A0A087WT01 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 SALL4P2-201ENST00000423288 2910 ntBASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 AL731566.1-201ENST00000620490 1937 ntBASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 AL121878.1-201ENST00000418638 859 ntBASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 CHEK2P5-201ENST00000423877 246 ntBASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 RPL34P20-201ENST00000442771 351 ntBASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 IGLVIV-64-201ENST00000518581 301 ntBASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 EIF4A2P5-201ENST00000529914 499 ntBASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms