Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RNU12-2P-201ENST00000364789 156 ntBASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 ISY1-202ENST00000393292 988 ntTSL 5 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 AL603766.1-201ENST00000407763 664 ntBASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 MIR320C1-201ENST00000408566 88 ntBASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 HMGB3P20-201ENST00000417997 600 ntBASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 RPSAP59-201ENST00000421048 890 ntBASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 ISCA1P6-201ENST00000427740 390 ntBASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 USP9YP9-201ENST00000429406 715 ntBASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 KCTD9P3-201ENST00000434597 1169 ntBASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 SNRPEP7-201ENST00000438350 220 ntBASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 CYP2C56P-201ENST00000440076 291 ntBASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 FUNDC2P2-202ENST00000443452 493 ntBASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 NDUFA5P7-201ENST00000452914 242 ntBASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 Z82190.1-201ENST00000454534 490 ntBASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 AC015820.1-201ENST00000473882 321 ntBASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 RN7SL549P-201ENST00000478997 282 ntBASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 AC111000.3-201ENST00000508057 576 ntBASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 FGF7P4-201ENST00000509595 295 ntBASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 OR7E83P-201ENST00000511021 970 ntBASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 PGAM4P2-201ENST00000512491 721 ntBASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 ADI1P2-201ENST00000514945 429 ntBASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 MAL2-203ENST00000534619 578 ntTSL 4 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 BMS1P15-201ENST00000554269 1141 ntBASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 AC099508.2-201ENST00000563098 510 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 AC010928.3-201ENST00000587712 541 ntBASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 RPL12P25-202ENST00000598100 674 ntBASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 AL162730.1-201ENST00000605734 292 ntBASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 MIR7162-201ENST00000611134 69 ntBASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 AC243830.3-201ENST00000616810 376 ntBASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 AC073862.4-201ENST00000622982 854 ntBASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 AC019278.1-201ENST00000623516 479 ntBASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC7.15□□□□□ -1.27
PCDHGA11Q9Y5H2 OR4G11P-202ENST00000642116 1414 ntBASIC7.15□□□□□ -1.27
PCDHGA11Q9Y5H2 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
PCDHGA11Q9Y5H2 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC7.15□□□□□ -1.27
PCDHGA11Q9Y5H2 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.15□□□□□ -1.27
PCDHGA11Q9Y5H2 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
PCDHGA11Q9Y5H2 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
PCDHGA11Q9Y5H2 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC7.15□□□□□ -1.27
PCDHGA11Q9Y5H2 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC7.15□□□□□ -1.27
PCDHGA11Q9Y5H2 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
PCDHGA11Q9Y5H2 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.27
PCDHGA11Q9Y5H2 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.15□□□□□ -1.27
PCDHGA11Q9Y5H2 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 MAPK10-270ENST00000641102 3538 ntBASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 RN7SKP174-201ENST00000363803 330 ntBASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 MIR181C-201ENST00000384881 110 ntBASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 RN7SKP225-201ENST00000410405 352 ntBASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 GNAI2P2-201ENST00000417003 916 ntBASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 EEF1GP7-201ENST00000422983 703 ntBASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 PRELID1P3-201ENST00000450055 643 ntBASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 AC022730.2-201ENST00000465359 452 ntBASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 KYNUP1-201ENST00000466683 1406 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms