Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 AC005252.1-201ENST00000604518 1063 ntBASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 AL451049.1-201ENST00000608672 497 ntBASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 AC020658.4-201ENST00000613987 684 ntBASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 SAMMSON-209ENST00000641222 1100 ntBASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 OR9G4-201ENST00000302957 984 ntBASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 RNU6-386P-201ENST00000362650 107 ntBASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 AP000534.2-201ENST00000412729 568 ntBASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 RPL35AP24-201ENST00000413846 330 ntBASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 RPL5P25-201ENST00000441148 775 ntBASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 AC107015.1-201ENST00000466902 747 ntBASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 RPL15P21-201ENST00000495592 567 ntBASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 ATG10-AS1-201ENST00000504846 648 ntBASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 AK4P6-201ENST00000505168 528 ntBASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 IMPA1P1-201ENST00000510718 842 ntBASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 SNORA48.9-201ENST00000516419 162 ntBASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 MTND2P13-201ENST00000577438 1039 ntBASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 AL162431.4-201ENST00000604674 411 ntBASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 WBP1LP8-201ENST00000617401 327 ntBASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 AC004808.2-201ENST00000627965 773 ntBASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 OR55B1P-203ENST00000641518 2602 ntBASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.02□□□□□ -1.61
ATG4BQ9Y4P1 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 RNA5SP183-201ENST00000362452 119 ntBASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 OR1L6-202ENST00000373684 1044 ntBASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 RNU6-1320P-201ENST00000390838 107 ntBASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 RNU1-149P-201ENST00000390870 161 ntBASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 RNA5SP105-201ENST00000391123 113 ntBASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 RNU6-1269P-201ENST00000391139 107 ntBASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 MIR1286-201ENST00000408112 78 ntBASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 MIR1178-201ENST00000408396 91 ntBASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 AC013470.3-201ENST00000420252 1194 ntBASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 FAM96AP1-201ENST00000430879 482 ntBASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 RPL7L1P9-201ENST00000431298 745 ntBASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 NOP56P2-201ENST00000447491 769 ntBASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 RBMY2TP-201ENST00000451162 947 ntBASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 AL606490.1-201ENST00000452266 765 ntBASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 AC079168.1-201ENST00000458741 345 ntBASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 RNU6-599P-201ENST00000459383 107 ntBASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 RNU6-1193P-201ENST00000459461 107 ntBASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 AC110749.1-201ENST00000462007 357 ntBASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 RPL7P39-201ENST00000481157 744 ntBASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 AC022133.1-201ENST00000490961 571 ntBASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 RPS24P16-201ENST00000497294 392 ntBASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 SEC11B-201ENST00000518383 499 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms