Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AL022393.1-201ENST00000625142 1677 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 AC007996.1-201ENST00000620414 2821 ntBASIC4.4□□□□□ -1.7
KCNIP3Q9Y2W7 AL672167.1-204ENST00000641875 3017 ntBASIC4.4□□□□□ -1.7
KCNIP3Q9Y2W7 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.4□□□□□ -1.7
KCNIP3Q9Y2W7 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
KCNIP3Q9Y2W7 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
KCNIP3Q9Y2W7 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
KCNIP3Q9Y2W7 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.4□□□□□ -1.7
KCNIP3Q9Y2W7 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
KCNIP3Q9Y2W7 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
KCNIP3Q9Y2W7 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
KCNIP3Q9Y2W7 AC087565.3-202ENST00000642085 1603 ntBASIC4.4□□□□□ -1.7
KCNIP3Q9Y2W7 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
KCNIP3Q9Y2W7 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 AC010132.2-201ENST00000295493 1043 ntBASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 GAPDHP42-201ENST00000406848 981 ntBASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 RPS3AP2-201ENST00000407190 754 ntBASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 RNA5SP231-201ENST00000410496 138 ntBASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 AC004690.1-201ENST00000418216 328 ntBASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 AC013429.2-201ENST00000418798 781 ntBASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 AC007064.3-201ENST00000422608 359 ntBASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 AC093084.1-201ENST00000424233 687 ntBASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 GTF2IP2-201ENST00000424290 697 ntBASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 AL161722.2-201ENST00000434731 981 ntBASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 PNKDP1-201ENST00000435914 430 ntBASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 RPL35AP21-201ENST00000437667 333 ntBASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 AL356121.1-201ENST00000442911 156 ntBASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 AL450996.1-201ENST00000445574 1202 ntBASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 CCRL1P1-201ENST00000449542 1053 ntBASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 AL672138.1-201ENST00000450604 1015 ntBASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 AC079168.1-201ENST00000458741 345 ntBASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 CBX1P5-201ENST00000475330 559 ntBASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 AC018639.1-201ENST00000492994 442 ntBASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 HMGB3P16-201ENST00000508037 287 ntBASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 RNA5SP464-201ENST00000516251 108 ntBASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 IGKV3D-25-201ENST00000519599 235 ntBASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 AC125612.1-201ENST00000547580 377 ntBASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 AC008147.3-201ENST00000548666 354 ntBASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 AP005119.2-201ENST00000579735 1105 ntBASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 AC096553.1-201ENST00000605169 829 ntBASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 GMCL1P2-201ENST00000605230 823 ntBASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 AC093775.1-201ENST00000624154 1868 ntBASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
KCNIP3Q9Y2W7 UGT2B26P-201ENST00000508672 1613 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 OR10J6P-201ENST00000289731 930 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 TMSB4XP2-201ENST00000335179 210 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 RNU6-386P-201ENST00000362650 107 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 RNU4-23P-201ENST00000362839 140 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 RNU1-65P-201ENST00000363919 148 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 RNA5SP131-201ENST00000365452 119 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 AC240504.1-201ENST00000395709 845 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 RN7SKP125-201ENST00000410481 302 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 AL035660.1-201ENST00000422041 222 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 Z85994.2-201ENST00000434327 452 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 AC064862.5-201ENST00000440618 334 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 AL031584.1-201ENST00000447169 754 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 MRPL35P2-201ENST00000448009 511 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 CST12P-201ENST00000457644 362 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 LARP7P4-201ENST00000481075 878 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms