Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.68□□□□□ -1.66
COPS3Q9UNS2 AC138866.2-201ENST00000508650 584 ntBASIC4.68□□□□□ -1.66
COPS3Q9UNS2 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.68□□□□□ -1.66
COPS3Q9UNS2 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.68□□□□□ -1.66
COPS3Q9UNS2 CYCSP22-201ENST00000517555 339 ntBASIC4.68□□□□□ -1.66
COPS3Q9UNS2 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.68□□□□□ -1.66
COPS3Q9UNS2 IGKV2-4-201ENST00000523070 340 ntBASIC4.68□□□□□ -1.66
COPS3Q9UNS2 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.68□□□□□ -1.66
COPS3Q9UNS2 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COPS3Q9UNS2 AL049872.1-201ENST00000556323 322 ntBASIC4.68□□□□□ -1.66
COPS3Q9UNS2 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.68□□□□□ -1.66
COPS3Q9UNS2 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.68□□□□□ -1.66
COPS3Q9UNS2 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.68□□□□□ -1.66
COPS3Q9UNS2 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.68□□□□□ -1.66
COPS3Q9UNS2 AC233280.2-201ENST00000603917 1070 ntBASIC4.68□□□□□ -1.66
COPS3Q9UNS2 AL162431.4-201ENST00000604674 411 ntBASIC4.68□□□□□ -1.66
COPS3Q9UNS2 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
COPS3Q9UNS2 AC015871.5-202ENST00000623252 701 ntBASIC4.68□□□□□ -1.66
COPS3Q9UNS2 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.68□□□□□ -1.66
COPS3Q9UNS2 AL596275.2-204ENST00000641628 552 ntBASIC4.68□□□□□ -1.66
COPS3Q9UNS2 AL596275.2-206ENST00000641957 626 ntBASIC4.68□□□□□ -1.66
COPS3Q9UNS2 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.68□□□□□ -1.66
COPS3Q9UNS2 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
COPS3Q9UNS2 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
COPS3Q9UNS2 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.68□□□□□ -1.66
COPS3Q9UNS2 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
COPS3Q9UNS2 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COPS3Q9UNS2 AC112255.1-201ENST00000624070 2493 ntBASIC4.68□□□□□ -1.66
COPS3Q9UNS2 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.68□□□□□ -1.66
COPS3Q9UNS2 LINC01355-201ENST00000566551 5444 ntBASIC4.68□□□□□ -1.66
COPS3Q9UNS2 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.68□□□□□ -1.66
COPS3Q9UNS2 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.68□□□□□ -1.66
COPS3Q9UNS2 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
COPS3Q9UNS2 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
COPS3Q9UNS2 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COPS3Q9UNS2 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.68□□□□□ -1.66
COPS3Q9UNS2 MTCO1P15-201ENST00000529569 1526 ntBASIC4.67□□□□□ -1.66
COPS3Q9UNS2 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
COPS3Q9UNS2 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.67□□□□□ -1.66
COPS3Q9UNS2 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.67□□□□□ -1.66
COPS3Q9UNS2 MIR133B-201ENST00000362210 119 ntBASIC4.67□□□□□ -1.66
COPS3Q9UNS2 RNA5SP46-201ENST00000362370 120 ntBASIC4.67□□□□□ -1.66
COPS3Q9UNS2 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COPS3Q9UNS2 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COPS3Q9UNS2 MARK2P12-201ENST00000420129 585 ntBASIC4.67□□□□□ -1.66
COPS3Q9UNS2 PTP4A1P1-201ENST00000420539 515 ntBASIC4.67□□□□□ -1.66
COPS3Q9UNS2 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.67□□□□□ -1.66
COPS3Q9UNS2 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.67□□□□□ -1.66
COPS3Q9UNS2 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.67□□□□□ -1.66
COPS3Q9UNS2 AC104843.2-201ENST00000427666 297 ntBASIC4.67□□□□□ -1.66
COPS3Q9UNS2 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.67□□□□□ -1.66
COPS3Q9UNS2 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.67□□□□□ -1.66
COPS3Q9UNS2 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.67□□□□□ -1.66
COPS3Q9UNS2 AC105399.1-202ENST00000447303 205 ntBASIC4.67□□□□□ -1.66
COPS3Q9UNS2 RPL7L1P1-201ENST00000448259 785 ntBASIC4.67□□□□□ -1.66
COPS3Q9UNS2 RBMY2TP-201ENST00000451162 947 ntBASIC4.67□□□□□ -1.66
COPS3Q9UNS2 NIP7P2-201ENST00000485801 544 ntBASIC4.67□□□□□ -1.66
COPS3Q9UNS2 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.67□□□□□ -1.66
COPS3Q9UNS2 RN7SKP34-201ENST00000516142 244 ntBASIC4.67□□□□□ -1.66
COPS3Q9UNS2 RN7SKP99-201ENST00000517028 307 ntBASIC4.67□□□□□ -1.66
COPS3Q9UNS2 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.67□□□□□ -1.66
COPS3Q9UNS2 AC022882.1-201ENST00000532142 501 ntBASIC4.67□□□□□ -1.66
COPS3Q9UNS2 YWHABP2-201ENST00000540201 713 ntBASIC4.67□□□□□ -1.66
COPS3Q9UNS2 NANOGNBP2-201ENST00000544753 553 ntBASIC4.67□□□□□ -1.66
COPS3Q9UNS2 NDUFA5P11-201ENST00000567995 343 ntBASIC4.67□□□□□ -1.66
COPS3Q9UNS2 AC005341.1-201ENST00000571086 708 ntBASIC4.67□□□□□ -1.66
COPS3Q9UNS2 RN7SL708P-201ENST00000580952 299 ntBASIC4.67□□□□□ -1.66
COPS3Q9UNS2 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.67□□□□□ -1.66
COPS3Q9UNS2 RN7SL435P-201ENST00000584418 282 ntBASIC4.67□□□□□ -1.66
COPS3Q9UNS2 AP002884.5-201ENST00000595053 1132 ntBASIC4.67□□□□□ -1.66
COPS3Q9UNS2 AC087283.1-201ENST00000604029 1074 ntBASIC4.67□□□□□ -1.66
COPS3Q9UNS2 AL096712.1-201ENST00000614561 159 ntBASIC4.67□□□□□ -1.66
COPS3Q9UNS2 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.67□□□□□ -1.66
COPS3Q9UNS2 MIR6778-201ENST00000617912 73 ntBASIC4.67□□□□□ -1.66
COPS3Q9UNS2 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC4.67□□□□□ -1.66
COPS3Q9UNS2 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COPS3Q9UNS2 AC100778.3-201ENST00000580060 1750 ntBASIC4.67□□□□□ -1.66
COPS3Q9UNS2 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.67□□□□□ -1.66
COPS3Q9UNS2 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
COPS3Q9UNS2 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
COPS3Q9UNS2 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COPS3Q9UNS2 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.67□□□□□ -1.66
COPS3Q9UNS2 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.67□□□□□ -1.66
COPS3Q9UNS2 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
COPS3Q9UNS2 AP001273.1-201ENST00000624493 3152 ntBASIC4.67□□□□□ -1.66
COPS3Q9UNS2 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COPS3Q9UNS2 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
COPS3Q9UNS2 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.66□□□□□ -1.66
COPS3Q9UNS2 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COPS3Q9UNS2 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COPS3Q9UNS2 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
COPS3Q9UNS2 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
COPS3Q9UNS2 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COPS3Q9UNS2 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
COPS3Q9UNS2 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COPS3Q9UNS2 AC005294.1-201ENST00000355509 281 ntBASIC4.66□□□□□ -1.66
COPS3Q9UNS2 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
COPS3Q9UNS2 PCNPP4-201ENST00000414817 517 ntBASIC4.66□□□□□ -1.66
COPS3Q9UNS2 BMS1P17-202ENST00000416720 316 ntBASIC4.66□□□□□ -1.66
COPS3Q9UNS2 SETP10-201ENST00000424368 814 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms