Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.74□□□□□ -1.33
PDLIM7Q9NR12 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PDLIM7Q9NR12 AC241584.2-201ENST00000637142 2090 ntBASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 AC007342.5-201ENST00000571340 2142 ntBASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 AP000526.1-201ENST00000603308 1388 ntBASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 RNA5SP46-201ENST00000362370 120 ntBASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 RNA5SP375-201ENST00000362975 119 ntBASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 Y_RNA.194-201ENST00000363985 102 ntBASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 RNA5SP500-201ENST00000364486 119 ntBASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 ATF1P1-201ENST00000406040 927 ntBASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 AL365203.2-201ENST00000423444 196 ntBASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 NIPA2P1-201ENST00000426223 976 ntBASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 MTCYBP39-201ENST00000437562 491 ntBASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 AL627224.1-201ENST00000448334 444 ntBASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 AC112187.1-201ENST00000455837 479 ntBASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 AL133445.1-201ENST00000467051 452 ntBASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 COPS8P2-201ENST00000473228 627 ntBASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 MTND3P7-201ENST00000474435 343 ntBASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 MTND5P13-201ENST00000513046 1079 ntBASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 RFPL4AP3-201ENST00000515267 345 ntBASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 ZDHHC20P3-201ENST00000531576 336 ntBASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 AC008126.1-201ENST00000549019 480 ntBASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 SETP1-201ENST00000556014 845 ntBASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 NTAN1P1-201ENST00000603150 646 ntBASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 RMST_10.1-201ENST00000616309 154 ntBASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 AL445670.1-201ENST00000618889 801 ntBASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 AC004836.1-201ENST00000623032 634 ntBASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 GNL2P1-201ENST00000451274 2190 ntBASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 AC117409.1-201ENST00000470499 1310 ntBASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 ZNF542P-204ENST00000482727 1305 ntBASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 AL359715.3-201ENST00000569267 2123 ntBASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC6.73□□□□□ -1.33
PDLIM7Q9NR12 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
PDLIM7Q9NR12 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.72□□□□□ -1.33
PDLIM7Q9NR12 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.72□□□□□ -1.33
PDLIM7Q9NR12 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.72□□□□□ -1.33
PDLIM7Q9NR12 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
PDLIM7Q9NR12 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PDLIM7Q9NR12 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PDLIM7Q9NR12 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PDLIM7Q9NR12 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PDLIM7Q9NR12 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PDLIM7Q9NR12 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PDLIM7Q9NR12 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
PDLIM7Q9NR12 SNORD113-6-201ENST00000363345 75 ntBASIC6.72□□□□□ -1.33
PDLIM7Q9NR12 RPL7P27-201ENST00000403775 720 ntBASIC6.72□□□□□ -1.33
PDLIM7Q9NR12 AC021876.1-201ENST00000425959 359 ntBASIC6.72□□□□□ -1.33
PDLIM7Q9NR12 AC127526.2-201ENST00000426436 775 ntBASIC6.72□□□□□ -1.33
PDLIM7Q9NR12 RPS27P18-201ENST00000431701 247 ntBASIC6.72□□□□□ -1.33
PDLIM7Q9NR12 NPM1P49-201ENST00000448027 714 ntBASIC6.72□□□□□ -1.33
PDLIM7Q9NR12 OR52J1P-201ENST00000450596 932 ntBASIC6.72□□□□□ -1.33
PDLIM7Q9NR12 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC6.72□□□□□ -1.33
PDLIM7Q9NR12 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.72□□□□□ -1.33
PDLIM7Q9NR12 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.72□□□□□ -1.33
PDLIM7Q9NR12 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.72□□□□□ -1.33
PDLIM7Q9NR12 AC105918.1-201ENST00000474399 838 ntBASIC6.72□□□□□ -1.33
PDLIM7Q9NR12 RPS27AP16-201ENST00000492222 470 ntBASIC6.72□□□□□ -1.33
PDLIM7Q9NR12 AC138866.2-201ENST00000508650 584 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms