Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 ATP5LP5-201ENST00000483050 299 ntBASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 RN7SKP253-201ENST00000516424 309 ntBASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 AC137627.1-201ENST00000545761 289 ntBASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 AC127381.1-201ENST00000555979 939 ntBASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 AL390334.1-201ENST00000556395 450 ntBASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 AL390726.5-202ENST00000564800 256 ntBASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 AL589935.2-201ENST00000616471 1231 ntBASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 AC090527.3-201ENST00000619041 548 ntBASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 AP001784.1-201ENST00000624107 428 ntBASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 LINC01739-205ENST00000641890 573 ntBASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 AL031595.2-201ENST00000624215 19071 ntBASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 AL109941.1-201ENST00000401925 229 ntBASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 OR4K12P-201ENST00000406538 961 ntBASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 RNA5SP487-201ENST00000410186 122 ntBASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 AL139128.1-201ENST00000413921 941 ntBASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 AC093162.1-201ENST00000419682 124 ntBASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 AL359265.1-201ENST00000440296 795 ntBASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 AL589765.3-201ENST00000446084 462 ntBASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 NPM1P52-201ENST00000518264 846 ntBASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 AC130364.2-201ENST00000528639 604 ntBASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 NMNAT1P5-201ENST00000559657 841 ntBASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 AC114947.2-201ENST00000565748 2125 ntBASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 AC095055.1-201ENST00000603472 1113 ntBASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 SNORA35B-201ENST00000607417 129 ntBASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 AL162574.1-201ENST00000615702 950 ntBASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 AP003499.2-201ENST00000624100 483 ntBASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 AC068870.1-201ENST00000563737 2455 ntBASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TM9SF3Q9HD45 AC026523.2-201ENST00000625039 7739 ntBASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 OR9K1P-202ENST00000641111 3217 ntBASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 AL121886.1-201ENST00000358609 435 ntBASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 SNORA17.1-201ENST00000362945 126 ntBASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 RN7SKP115-201ENST00000363177 317 ntBASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 RPSAP35-201ENST00000413753 818 ntBASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 AL133482.1-201ENST00000415988 498 ntBASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 AC009784.1-201ENST00000426484 460 ntBASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 MTCO1P51-201ENST00000427672 1060 ntBASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 LINC02210-201ENST00000444561 288 ntBASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 AC083899.1-201ENST00000454465 3819 ntBASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 RPS17P5-201ENST00000498293 408 ntBASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 RNU4-18P-201ENST00000516751 149 ntBASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 FTH1P11-201ENST00000517577 551 ntBASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms