Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 RNU1-149P-201ENST00000390870 161 ntBASIC6.17□□□□□ -1.42
UPF2Q9HAU5 AC012519.1-201ENST00000424588 610 ntBASIC6.17□□□□□ -1.42
UPF2Q9HAU5 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 RPS26P4-201ENST00000431743 355 ntBASIC6.17□□□□□ -1.42
UPF2Q9HAU5 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 TXNP5-201ENST00000441043 315 ntBASIC6.17□□□□□ -1.42
UPF2Q9HAU5 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 AL133445.1-201ENST00000467051 452 ntBASIC6.17□□□□□ -1.42
UPF2Q9HAU5 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 AC005868.1-201ENST00000536421 331 ntBASIC6.17□□□□□ -1.42
UPF2Q9HAU5 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.17□□□□□ -1.42
UPF2Q9HAU5 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 AC012078.1-201ENST00000405035 1646 ntBASIC6.17□□□□□ -1.42
UPF2Q9HAU5 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
UPF2Q9HAU5 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
UPF2Q9HAU5 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
UPF2Q9HAU5 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
UPF2Q9HAU5 OR7E156P-201ENST00000400303 464 ntBASIC6.16□□□□□ -1.42
UPF2Q9HAU5 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.16□□□□□ -1.42
UPF2Q9HAU5 SLC35E1P1-201ENST00000419313 864 ntBASIC6.16□□□□□ -1.42
UPF2Q9HAU5 RFESDP1-201ENST00000422350 461 ntBASIC6.16□□□□□ -1.42
UPF2Q9HAU5 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.16□□□□□ -1.42
UPF2Q9HAU5 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.16□□□□□ -1.42
UPF2Q9HAU5 RN7SL346P-201ENST00000491561 294 ntBASIC6.16□□□□□ -1.42
UPF2Q9HAU5 GTF2F2P1-201ENST00000511083 675 ntBASIC6.16□□□□□ -1.42
UPF2Q9HAU5 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.16□□□□□ -1.42
UPF2Q9HAU5 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.16□□□□□ -1.42
UPF2Q9HAU5 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.16□□□□□ -1.42
UPF2Q9HAU5 SETP1-201ENST00000556014 845 ntBASIC6.16□□□□□ -1.42
UPF2Q9HAU5 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
UPF2Q9HAU5 MIR1273E-201ENST00000581165 102 ntBASIC6.16□□□□□ -1.42
UPF2Q9HAU5 AC108865.2-201ENST00000606881 432 ntBASIC6.16□□□□□ -1.42
UPF2Q9HAU5 AC020658.4-201ENST00000613987 684 ntBASIC6.16□□□□□ -1.42
UPF2Q9HAU5 AL096712.1-201ENST00000614561 159 ntBASIC6.16□□□□□ -1.42
UPF2Q9HAU5 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.16□□□□□ -1.42
UPF2Q9HAU5 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
UPF2Q9HAU5 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
UPF2Q9HAU5 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.16□□□□□ -1.42
UPF2Q9HAU5 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
UPF2Q9HAU5 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.15□□□□□ -1.42
UPF2Q9HAU5 OR55B1P-203ENST00000641518 2602 ntBASIC6.15□□□□□ -1.42
UPF2Q9HAU5 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
UPF2Q9HAU5 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
UPF2Q9HAU5 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.15□□□□□ -1.42
UPF2Q9HAU5 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.15□□□□□ -1.42
UPF2Q9HAU5 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.15□□□□□ -1.42
UPF2Q9HAU5 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
UPF2Q9HAU5 AP000580.1-201ENST00000404439 358 ntBASIC6.15□□□□□ -1.42
UPF2Q9HAU5 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.15□□□□□ -1.42
UPF2Q9HAU5 AC115283.1-201ENST00000427353 400 ntBASIC6.15□□□□□ -1.42
UPF2Q9HAU5 FAM96AP1-201ENST00000430879 482 ntBASIC6.15□□□□□ -1.42
UPF2Q9HAU5 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.15□□□□□ -1.42
UPF2Q9HAU5 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.15□□□□□ -1.42
UPF2Q9HAU5 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC6.15□□□□□ -1.42
UPF2Q9HAU5 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.15□□□□□ -1.42
UPF2Q9HAU5 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC6.15□□□□□ -1.42
UPF2Q9HAU5 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
UPF2Q9HAU5 EIF1P7-201ENST00000487533 337 ntBASIC6.15□□□□□ -1.42
UPF2Q9HAU5 BTG4P1-201ENST00000510421 183 ntBASIC6.15□□□□□ -1.42
UPF2Q9HAU5 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.15□□□□□ -1.42
UPF2Q9HAU5 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC6.15□□□□□ -1.42
UPF2Q9HAU5 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.15□□□□□ -1.42
UPF2Q9HAU5 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC6.15□□□□□ -1.42
UPF2Q9HAU5 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC6.15□□□□□ -1.42
UPF2Q9HAU5 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC6.15□□□□□ -1.42
UPF2Q9HAU5 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.15□□□□□ -1.42
UPF2Q9HAU5 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.15□□□□□ -1.42
UPF2Q9HAU5 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.15□□□□□ -1.42
UPF2Q9HAU5 AC010245.2-201ENST00000606908 1167 ntBASIC6.15□□□□□ -1.42
UPF2Q9HAU5 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.15□□□□□ -1.42
UPF2Q9HAU5 AL139407.1-201ENST00000613826 1175 ntBASIC6.15□□□□□ -1.42
UPF2Q9HAU5 MIR6071-201ENST00000616741 78 ntBASIC6.15□□□□□ -1.42
UPF2Q9HAU5 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.15□□□□□ -1.42
UPF2Q9HAU5 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC6.15□□□□□ -1.43
UPF2Q9HAU5 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC6.15□□□□□ -1.43
UPF2Q9HAU5 CASC19-206ENST00000641028 1430 ntBASIC6.15□□□□□ -1.43
UPF2Q9HAU5 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
UPF2Q9HAU5 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.15□□□□□ -1.43
UPF2Q9HAU5 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
UPF2Q9HAU5 AL359922.3-201ENST00000624779 1670 ntBASIC6.14□□□□□ -1.43
UPF2Q9HAU5 SALL4P2-201ENST00000423288 2910 ntBASIC6.14□□□□□ -1.43
UPF2Q9HAU5 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
UPF2Q9HAU5 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms