Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.11□□□□□ -1.43
VPS11Q9H270 AC036176.3-201ENST00000602456 418 ntBASIC6.11□□□□□ -1.43
VPS11Q9H270 AL356055.1-201ENST00000602528 446 ntBASIC6.11□□□□□ -1.43
VPS11Q9H270 AC012557.1-201ENST00000607115 611 ntBASIC6.11□□□□□ -1.43
VPS11Q9H270 AC131235.4-201ENST00000609288 620 ntBASIC6.11□□□□□ -1.43
VPS11Q9H270 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.11□□□□□ -1.43
VPS11Q9H270 AC126175.1-201ENST00000617041 758 ntBASIC6.11□□□□□ -1.43
VPS11Q9H270 RNA5SP439-201ENST00000617595 124 ntBASIC6.11□□□□□ -1.43
VPS11Q9H270 MIR6503-201ENST00000622884 86 ntBASIC6.11□□□□□ -1.43
VPS11Q9H270 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VPS11Q9H270 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VPS11Q9H270 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
VPS11Q9H270 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VPS11Q9H270 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VPS11Q9H270 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
VPS11Q9H270 CASC19-260ENST00000641828 2001 ntBASIC6.11□□□□□ -1.43
VPS11Q9H270 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VPS11Q9H270 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
VPS11Q9H270 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VPS11Q9H270 AC232271.1-201ENST00000602455 2715 ntBASIC6.11□□□□□ -1.43
VPS11Q9H270 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VPS11Q9H270 NLRP3P1-201ENST00000622303 1785 ntBASIC6.11□□□□□ -1.43
VPS11Q9H270 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.11□□□□□ -1.43
VPS11Q9H270 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.11□□□□□ -1.43
VPS11Q9H270 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VPS11Q9H270 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.1□□□□□ -1.43
VPS11Q9H270 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VPS11Q9H270 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VPS11Q9H270 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.1□□□□□ -1.43
VPS11Q9H270 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.1□□□□□ -1.43
VPS11Q9H270 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VPS11Q9H270 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC6.1□□□□□ -1.43
VPS11Q9H270 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
VPS11Q9H270 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VPS11Q9H270 AC005224.3-201ENST00000584683 2140 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
VPS11Q9H270 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.1□□□□□ -1.43
VPS11Q9H270 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VPS11Q9H270 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.1□□□□□ -1.43
VPS11Q9H270 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VPS11Q9H270 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VPS11Q9H270 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VPS11Q9H270 RNA5SP375-201ENST00000362975 119 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 U3.10-201ENST00000364459 214 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 RNU6-517P-201ENST00000384362 110 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 NUDT19P3-201ENST00000404698 555 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VPS11Q9H270 XKRYP4-201ENST00000414395 483 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 RPL21P50-201ENST00000417698 477 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS11Q9H270 OR6K4P-201ENST00000423179 955 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 GPN3P1-201ENST00000423883 535 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC6.1□□□□□ -1.43
VPS11Q9H270 AC112492.2-201ENST00000432774 1030 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VPS11Q9H270 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS11Q9H270 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC6.1□□□□□ -1.43
VPS11Q9H270 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS11Q9H270 CYCSP51-201ENST00000443545 318 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 RPS27P5-201ENST00000444247 244 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.1□□□□□ -1.43
VPS11Q9H270 XKRYP5-201ENST00000449659 483 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.1□□□□□ -1.43
VPS11Q9H270 Z83838.1-202ENST00000456225 839 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS11Q9H270 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
VPS11Q9H270 AC107398.1-201ENST00000486904 505 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 AC073610.1-201ENST00000489971 396 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 AC134050.1-201ENST00000495088 933 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 AC025459.1-201ENST00000504072 156 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 OR4D12P-201ENST00000509361 911 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 LTV1P1-201ENST00000510683 1237 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS11Q9H270 RN7SKP141-201ENST00000516167 338 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC6.1□□□□□ -1.43
VPS11Q9H270 OR10V3P-201ENST00000525712 725 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VPS11Q9H270 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC6.1□□□□□ -1.43
VPS11Q9H270 SLC25A51P2-201ENST00000535708 889 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.1□□□□□ -1.43
VPS11Q9H270 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS11Q9H270 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.1□□□□□ -1.43
VPS11Q9H270 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS11Q9H270 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS11Q9H270 AC037479.1-201ENST00000558361 625 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 AL356801.1-201ENST00000559320 294 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS11Q9H270 AGGF1P9-201ENST00000561884 913 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS11Q9H270 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.1□□□□□ -1.43
VPS11Q9H270 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.1□□□□□ -1.43
VPS11Q9H270 MIR4732-201ENST00000581873 76 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC6.1□□□□□ -1.43
VPS11Q9H270 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.1□□□□□ -1.43
VPS11Q9H270 AC010738.1-201ENST00000604970 987 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 AL390877.1-201ENST00000605704 214 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 SNORA74.4-201ENST00000607595 199 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 AC103591.3-201ENST00000608684 209 ntBASIC6.1□□□□□ -1.43
VPS11Q9H270 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC6.1□□□□□ -1.43
VPS11Q9H270 VN1R7P-201ENST00000619242 903 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms