Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 AC012414.2-201ENST00000559474 187 ntBASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 RNA5SP223-201ENST00000365174 120 ntBASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 BPHL-201ENST00000380368 797 ntTSL 5 BASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 AL358176.3-201ENST00000420757 454 ntBASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 RPL12P17-201ENST00000432393 498 ntBASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 AL450263.2-201ENST00000439400 589 ntBASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 AC114878.1-201ENST00000441166 358 ntBASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 PTMAP3-201ENST00000447474 330 ntBASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 VDAC2P4-201ENST00000452925 711 ntBASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 RPL23AP12-201ENST00000467573 473 ntBASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 CCDC75P1-201ENST00000469247 791 ntBASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 NPM1P28-201ENST00000492269 840 ntBASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 RNU6-889P-201ENST00000517189 103 ntBASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 IGKV2-18-201ENST00000522607 343 ntBASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 SMARCE1P4-201ENST00000523647 241 ntBASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 AC010200.2-201ENST00000605098 235 ntBASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 AC109309.2-201ENST00000612597 332 ntBASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 MIR6837-201ENST00000620884 64 ntBASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 MIR8080-201ENST00000622224 89 ntBASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 AC020763.5-201ENST00000623298 430 ntBASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 AC104820.1-201ENST00000624183 307 ntBASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC7.16□□□□□ -1.26
CHMP4AQ9BY43 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 AC019050.1-201ENST00000418508 492 ntBASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 AC079355.1-201ENST00000421770 223 ntBASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 AC007161.1-204ENST00000423039 460 ntBASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 RPL12P34-201ENST00000424532 479 ntBASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 TEX41-206ENST00000432608 661 ntTSL 3 BASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 OR6D1P-201ENST00000436165 939 ntBASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 AC100832.1-201ENST00000471945 383 ntBASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 AC090638.1-201ENST00000498296 909 ntBASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 GAPDHP62-201ENST00000515313 990 ntBASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 RN7SKP253-201ENST00000516424 309 ntBASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 AC235565.1-201ENST00000456962 1325 ntBASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CHMP4AQ9BY43 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC7.15□□□□□ -1.27
CHMP4AQ9BY43 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
CHMP4AQ9BY43 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CHMP4AQ9BY43 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
CHMP4AQ9BY43 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
CHMP4AQ9BY43 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC7.15□□□□□ -1.27
CHMP4AQ9BY43 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC7.15□□□□□ -1.27
CHMP4AQ9BY43 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms