Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AL353678.1-201ENST00000422735 741 ntBASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 RPL7P44-201ENST00000424827 742 ntBASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AL358934.1-201ENST00000432346 324 ntBASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 GAPDHP20-201ENST00000444107 1007 ntBASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 SNORD19B-201ENST00000459623 84 ntBASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AC026254.2-201ENST00000475295 371 ntBASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AC022336.1-201ENST00000475510 337 ntBASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AC005550.2-201ENST00000476382 318 ntBASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AC090013.1-201ENST00000485147 480 ntBASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AC103851.1-201ENST00000506833 274 ntBASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AC093870.1-201ENST00000506837 213 ntBASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AC018992.1-201ENST00000523778 2149 ntBASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 SUMO2P15-201ENST00000604285 278 ntBASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AL451085.1-201ENST00000604546 690 ntBASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AC107214.2-201ENST00000608204 634 ntBASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 RMST_3.1-201ENST00000611651 109 ntBASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 5S_rRNA.23-201ENST00000612086 102 ntBASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AC129778.1-202ENST00000623812 261 ntBASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 LINC01347-202ENST00000627498 3841 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AL591379.1-207ENST00000635982 261 ntBASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 CRYM-AS1-204ENST00000637983 556 ntBASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 LL22NC03-63E9.3-201ENST00000407120 3111 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 LINC01616-201ENST00000561816 2280 ntBASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 TMEM43-201ENST00000306077 3341 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 HIPK2-201ENST00000342645 2937 ntTSL 5 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 CCDC15-203ENST00000529051 3924 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 INTS7-201ENST00000366992 3380 ntTSL 2 BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 COA1-203ENST00000395879 2448 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 Y_RNA.1-201ENST00000352915 104 ntBASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 MIR1284-201ENST00000408337 120 ntBASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 RN7SKP32-201ENST00000410167 303 ntBASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 AC245054.2-201ENST00000415639 319 ntBASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 OR2B7P-201ENST00000429302 934 ntBASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 GTF2IP13-201ENST00000438487 386 ntBASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 TVP23CP1-201ENST00000450317 639 ntBASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 RPS24P6-201ENST00000452670 400 ntBASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 ARPC3P2-201ENST00000457786 533 ntBASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 PFN1P6-201ENST00000476786 399 ntBASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 ACTG1P13-201ENST00000486987 1043 ntBASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 AC093267.1-201ENST00000489176 961 ntBASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 OR51A1P-201ENST00000511110 946 ntBASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 MTCO2P24-201ENST00000515611 426 ntBASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 RNA5SP34-201ENST00000516887 130 ntBASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 BRD9P1-201ENST00000529855 560 ntBASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 AC007068.2-201ENST00000543168 395 ntBASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 AL117187.1-201ENST00000555482 181 ntBASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 CTHRC1P1-201ENST00000605383 469 ntBASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 AP000238.1-201ENST00000608759 426 ntBASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 uc_338.5-201ENST00000611839 155 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms