Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 RPS23P9-201ENST00000448848 438 ntBASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 MTCO2P18-201ENST00000457151 658 ntBASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AC044810.1-201ENST00000480271 711 ntBASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 RN7SL741P-201ENST00000482473 289 ntBASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 MTND3P5-201ENST00000512798 333 ntBASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 EEF1B2P2-201ENST00000519625 676 ntBASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 NDUFA5P2-201ENST00000519723 344 ntBASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AC074051.3-201ENST00000570238 358 ntBASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AP005136.2-201ENST00000583253 1049 ntBASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AC111186.1-201ENST00000604684 130 ntBASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AL035410.2-201ENST00000604963 864 ntBASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AC026951.2-201ENST00000613847 241 ntBASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AL133243.1-201ENST00000614487 366 ntBASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AC005514.1-201ENST00000623521 208 ntBASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AC061999.1-201ENST00000624454 177 ntBASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AC120349.2-201ENST00000625002 298 ntBASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 TEX41-293ENST00000630451 690 ntTSL 5 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AC099063.3-201ENST00000642066 185 ntBASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 AC007406.5-201ENST00000570140 3170 ntBASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 RAD17P2-201ENST00000451754 1977 ntBASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.46□□□□□ -1.22
TRAIPQ9BWF2 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 MAPK10-383ENST00000642032 3390 ntBASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 AL390237.1-201ENST00000404226 1415 ntBASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 AC010329.1-201ENST00000593903 8328 ntBASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 ZNF402P-201ENST00000404435 3100 ntBASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 RNU6-500P-201ENST00000362349 107 ntBASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 MIR506-201ENST00000384998 124 ntBASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 SNORA26.8-201ENST00000391306 124 ntBASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 AL589647.1-201ENST00000402485 466 ntBASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 NPM1P11-201ENST00000417106 855 ntBASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 REREP1Y-201ENST00000422655 198 ntBASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 AC091390.2-201ENST00000432573 374 ntBASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 NPM1P33-201ENST00000438918 872 ntBASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 REREP2Y-201ENST00000439103 200 ntBASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 NDUFA12P1-201ENST00000455914 406 ntBASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 RPL7AP10-201ENST00000481016 791 ntBASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 NAT2-202ENST00000520116 716 ntTSL 3 BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 HIGD1AP10-201ENST00000527837 282 ntBASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 AC024405.1-201ENST00000532521 1042 ntBASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 AC007068.2-201ENST00000543168 395 ntBASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 HNRNPA1P74-201ENST00000560782 835 ntBASIC7.45□□□□□ -1.22
TRAIPQ9BWF2 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms