Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SIN3AQ96ST3 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC7.2□□□□□ -1.26
SIN3AQ96ST3 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
SIN3AQ96ST3 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SIN3AQ96ST3 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SIN3AQ96ST3 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SIN3AQ96ST3 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SIN3AQ96ST3 RNA5SP187-201ENST00000384400 119 ntBASIC7.2□□□□□ -1.26
SIN3AQ96ST3 CHMP1B2P-201ENST00000399581 597 ntBASIC7.2□□□□□ -1.26
SIN3AQ96ST3 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC7.2□□□□□ -1.26
SIN3AQ96ST3 AC093414.1-201ENST00000434712 514 ntBASIC7.2□□□□□ -1.26
SIN3AQ96ST3 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC7.2□□□□□ -1.26
SIN3AQ96ST3 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC7.2□□□□□ -1.26
SIN3AQ96ST3 CEACAMP7-201ENST00000444105 496 ntBASIC7.2□□□□□ -1.26
SIN3AQ96ST3 HNRNPDLP2-201ENST00000455248 751 ntBASIC7.2□□□□□ -1.26
SIN3AQ96ST3 AC140172.1-201ENST00000502928 141 ntBASIC7.2□□□□□ -1.26
SIN3AQ96ST3 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SIN3AQ96ST3 MIR4436B2-201ENST00000581415 91 ntBASIC7.2□□□□□ -1.26
SIN3AQ96ST3 MIR4436B1-201ENST00000583272 91 ntBASIC7.2□□□□□ -1.26
SIN3AQ96ST3 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC7.2□□□□□ -1.26
SIN3AQ96ST3 AC087783.2-201ENST00000605070 562 ntBASIC7.2□□□□□ -1.26
SIN3AQ96ST3 AC024940.4-201ENST00000605507 246 ntBASIC7.2□□□□□ -1.26
SIN3AQ96ST3 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC7.2□□□□□ -1.26
SIN3AQ96ST3 AC073575.2-201ENST00000614212 627 ntBASIC7.2□□□□□ -1.26
SIN3AQ96ST3 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC7.2□□□□□ -1.26
SIN3AQ96ST3 AC037198.3-201ENST00000616754 526 ntBASIC7.2□□□□□ -1.26
SIN3AQ96ST3 AC112694.2-201ENST00000623697 768 ntBASIC7.2□□□□□ -1.26
SIN3AQ96ST3 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SIN3AQ96ST3 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
SIN3AQ96ST3 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
SIN3AQ96ST3 UQCRC2P1-201ENST00000417777 1332 ntBASIC7.2□□□□□ -1.26
SIN3AQ96ST3 ECM1P2-201ENST00000503354 1577 ntBASIC7.2□□□□□ -1.26
SIN3AQ96ST3 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7.2□□□□□ -1.26
SIN3AQ96ST3 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SIN3AQ96ST3 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SIN3AQ96ST3 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SIN3AQ96ST3 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
SIN3AQ96ST3 TBCAP2-201ENST00000416175 326 ntBASIC7.19□□□□□ -1.26
SIN3AQ96ST3 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC7.19□□□□□ -1.26
SIN3AQ96ST3 RPL12P3-201ENST00000440080 396 ntBASIC7.19□□□□□ -1.26
SIN3AQ96ST3 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC7.19□□□□□ -1.26
SIN3AQ96ST3 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC7.19□□□□□ -1.26
SIN3AQ96ST3 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC7.19□□□□□ -1.26
SIN3AQ96ST3 RN7SL97P-201ENST00000486780 299 ntBASIC7.19□□□□□ -1.26
SIN3AQ96ST3 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC7.19□□□□□ -1.26
SIN3AQ96ST3 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC7.19□□□□□ -1.26
SIN3AQ96ST3 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC7.19□□□□□ -1.26
SIN3AQ96ST3 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC7.19□□□□□ -1.26
SIN3AQ96ST3 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC7.19□□□□□ -1.26
SIN3AQ96ST3 AC104687.2-201ENST00000604442 342 ntBASIC7.19□□□□□ -1.26
SIN3AQ96ST3 EIF3FP1-201ENST00000613970 806 ntBASIC7.19□□□□□ -1.26
SIN3AQ96ST3 AC091905.4-201ENST00000623432 202 ntBASIC7.19□□□□□ -1.26
SIN3AQ96ST3 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC7.19□□□□□ -1.26
SIN3AQ96ST3 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC7.19□□□□□ -1.26
SIN3AQ96ST3 CR383656.5-201ENST00000547616 1340 ntBASIC7.19□□□□□ -1.26
SIN3AQ96ST3 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC7.19□□□□□ -1.26
SIN3AQ96ST3 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SIN3AQ96ST3 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SIN3AQ96ST3 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC7.19□□□□□ -1.26
SIN3AQ96ST3 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SIN3AQ96ST3 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC7.19□□□□□ -1.26
SIN3AQ96ST3 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SIN3AQ96ST3 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SIN3AQ96ST3 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
SIN3AQ96ST3 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SIN3AQ96ST3 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SIN3AQ96ST3 AC100778.3-201ENST00000580060 1750 ntBASIC7.18□□□□□ -1.26
SIN3AQ96ST3 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
SIN3AQ96ST3 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
SIN3AQ96ST3 AC007998.4-201ENST00000612496 2533 ntBASIC7.18□□□□□ -1.26
SIN3AQ96ST3 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
SIN3AQ96ST3 RNA5SP191-201ENST00000362585 102 ntBASIC7.18□□□□□ -1.26
SIN3AQ96ST3 GTF2IP5-201ENST00000414608 731 ntBASIC7.18□□□□□ -1.26
SIN3AQ96ST3 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC7.18□□□□□ -1.26
SIN3AQ96ST3 SUMO2P1-206ENST00000445436 284 ntBASIC7.18□□□□□ -1.26
SIN3AQ96ST3 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SIN3AQ96ST3 CR383656.1-201ENST00000484916 377 ntBASIC7.18□□□□□ -1.26
SIN3AQ96ST3 AC022616.2-201ENST00000523185 300 ntBASIC7.18□□□□□ -1.26
SIN3AQ96ST3 RGS5-219ENST00000528019 512 ntTSL 4 BASIC7.18□□□□□ -1.26
SIN3AQ96ST3 AC005000.1-201ENST00000536192 288 ntBASIC7.18□□□□□ -1.26
SIN3AQ96ST3 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC7.18□□□□□ -1.26
SIN3AQ96ST3 AC127024.5-201ENST00000580085 462 ntBASIC7.18□□□□□ -1.26
SIN3AQ96ST3 AC007448.1-201ENST00000582714 234 ntBASIC7.18□□□□□ -1.26
SIN3AQ96ST3 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC7.18□□□□□ -1.26
SIN3AQ96ST3 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC7.18□□□□□ -1.26
SIN3AQ96ST3 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
SIN3AQ96ST3 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
SIN3AQ96ST3 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC7.18□□□□□ -1.26
SIN3AQ96ST3 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC7.18□□□□□ -1.26
SIN3AQ96ST3 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
SIN3AQ96ST3 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC7.17□□□□□ -1.26
SIN3AQ96ST3 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC7.17□□□□□ -1.26
SIN3AQ96ST3 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
SIN3AQ96ST3 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
SIN3AQ96ST3 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
SIN3AQ96ST3 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC7.17□□□□□ -1.26
SIN3AQ96ST3 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC7.17□□□□□ -1.26
SIN3AQ96ST3 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC7.17□□□□□ -1.26
SIN3AQ96ST3 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC7.17□□□□□ -1.26
SIN3AQ96ST3 AC112498.1-201ENST00000444401 332 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms