Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC068993.1-201ENST00000546724 589 ntBASIC5.43□□□□□ -1.54
SNX18Q96RF0 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.43□□□□□ -1.54
SNX18Q96RF0 LSM3P2-201ENST00000551246 273 ntBASIC5.43□□□□□ -1.54
SNX18Q96RF0 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.43□□□□□ -1.54
SNX18Q96RF0 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.43□□□□□ -1.54
SNX18Q96RF0 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.43□□□□□ -1.54
SNX18Q96RF0 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.43□□□□□ -1.54
SNX18Q96RF0 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.43□□□□□ -1.54
SNX18Q96RF0 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.43□□□□□ -1.54
SNX18Q96RF0 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.43□□□□□ -1.54
SNX18Q96RF0 AC060780.2-201ENST00000589047 198 ntBASIC5.43□□□□□ -1.54
SNX18Q96RF0 AC018809.2-201ENST00000602436 3823 ntBASIC5.43□□□□□ -1.54
SNX18Q96RF0 Z94722.1-201ENST00000604328 474 ntBASIC5.43□□□□□ -1.54
SNX18Q96RF0 RPSAP75-201ENST00000605848 301 ntBASIC5.43□□□□□ -1.54
SNX18Q96RF0 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.43□□□□□ -1.54
SNX18Q96RF0 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SNX18Q96RF0 AC078883.4-201ENST00000623218 367 ntBASIC5.43□□□□□ -1.54
SNX18Q96RF0 AC004943.3-201ENST00000624116 600 ntBASIC5.43□□□□□ -1.54
SNX18Q96RF0 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.43□□□□□ -1.54
SNX18Q96RF0 AC005618.4-201ENST00000625053 554 ntBASIC5.43□□□□□ -1.54
SNX18Q96RF0 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SNX18Q96RF0 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SNX18Q96RF0 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.43□□□□□ -1.54
SNX18Q96RF0 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.43□□□□□ -1.54
SNX18Q96RF0 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SNX18Q96RF0 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.43□□□□□ -1.54
SNX18Q96RF0 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.43□□□□□ -1.54
SNX18Q96RF0 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.43□□□□□ -1.54
SNX18Q96RF0 CIR1P2-201ENST00000514821 1342 ntBASIC5.43□□□□□ -1.54
SNX18Q96RF0 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SNX18Q96RF0 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
SNX18Q96RF0 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SNX18Q96RF0 NEPNP-201ENST00000404786 1371 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SNX18Q96RF0 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SNX18Q96RF0 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SNX18Q96RF0 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SNX18Q96RF0 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 RNU5B-1-201ENST00000363286 116 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 RN7SKP128-201ENST00000364270 303 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SNX18Q96RF0 RNA5SP105-201ENST00000391123 113 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 RNA5SP198-201ENST00000410376 127 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 RPS24P7-201ENST00000416921 246 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 EIF4A1P1-201ENST00000420241 934 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 AL645936.1-201ENST00000441979 518 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 HMGB1P5-202ENST00000451497 985 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 Z95152.1-201ENST00000453556 656 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 RPS4XP6-201ENST00000477670 797 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 RPL34P33-201ENST00000486062 334 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 AC091874.2-201ENST00000505889 720 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 GOLGA5P1-201ENST00000507317 980 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 AC095052.1-201ENST00000509955 863 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 UGT2A3P7-201ENST00000510485 734 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 AC118465.1-201ENST00000513820 1271 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 snoU109.5-201ENST00000516231 132 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 MTCYBP19-201ENST00000517463 1124 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SNX18Q96RF0 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 AL049830.4-201ENST00000555149 351 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 AC009962.1-201ENST00000567327 3813 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 AC012254.4-201ENST00000588843 273 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 COX6CP7-201ENST00000597056 208 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 VN1R78P-201ENST00000597393 564 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 AC146944.4-201ENST00000602697 718 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 AC021171.1-201ENST00000603137 706 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 AL139344.1-201ENST00000605228 195 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 RPL23AP61-201ENST00000623642 466 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms