Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 AC013488.1-201ENST00000526618 1838 ntBASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 RNA5SP346-201ENST00000363541 121 ntBASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 BPHL-201ENST00000380368 797 ntTSL 5 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 MTCO1P56-201ENST00000401674 224 ntBASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 RNU2-16P-201ENST00000410712 136 ntBASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 PGBD4P8-201ENST00000412993 562 ntBASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 AC105402.1-201ENST00000413336 545 ntBASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 OR4K6P-201ENST00000416478 897 ntBASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 AL591503.2-201ENST00000442314 1005 ntBASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 AC007327.1-201ENST00000447461 264 ntBASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 RNU6-956P-201ENST00000458868 103 ntBASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 RN7SL326P-201ENST00000477493 296 ntBASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 RN7SL714P-201ENST00000487050 298 ntBASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 AC069304.1-201ENST00000491593 704 ntBASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 AP000662.1-201ENST00000530952 487 ntBASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 DUXAP1-201ENST00000556632 463 ntBASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 AC090616.1-201ENST00000583895 447 ntBASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 OR7A8P-201ENST00000595427 913 ntBASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 AC139769.3-201ENST00000618383 175 ntBASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 MRPL57P1-201ENST00000621486 265 ntBASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 AC008443.7-201ENST00000622195 246 ntBASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
SYNGAP1Q96PV0 AC062022.1-201ENST00000451026 1684 ntBASIC7.21□□□□□ -1.25
SYNGAP1Q96PV0 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
SYNGAP1Q96PV0 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
SYNGAP1Q96PV0 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
SYNGAP1Q96PV0 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.25
SYNGAP1Q96PV0 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
SYNGAP1Q96PV0 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
SYNGAP1Q96PV0 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.21□□□□□ -1.25
SYNGAP1Q96PV0 AC107980.1-201ENST00000558671 3355 ntBASIC7.21□□□□□ -1.25
SYNGAP1Q96PV0 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.21□□□□□ -1.25
SYNGAP1Q96PV0 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC7.21□□□□□ -1.25
SYNGAP1Q96PV0 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
SYNGAP1Q96PV0 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.21□□□□□ -1.26
SYNGAP1Q96PV0 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SYNGAP1Q96PV0 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SYNGAP1Q96PV0 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SYNGAP1Q96PV0 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SYNGAP1Q96PV0 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SYNGAP1Q96PV0 AC010168.2-201ENST00000562691 5428 ntBASIC7.21□□□□□ -1.26
SYNGAP1Q96PV0 Y_RNA.465-201ENST00000384293 102 ntBASIC7.21□□□□□ -1.26
SYNGAP1Q96PV0 SNORA26.8-201ENST00000391306 124 ntBASIC7.21□□□□□ -1.26
SYNGAP1Q96PV0 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.21□□□□□ -1.26
SYNGAP1Q96PV0 OR8G2P-201ENST00000412796 908 ntBASIC7.21□□□□□ -1.26
SYNGAP1Q96PV0 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC7.21□□□□□ -1.26
SYNGAP1Q96PV0 RPS3P2-201ENST00000421346 701 ntBASIC7.21□□□□□ -1.26
SYNGAP1Q96PV0 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC7.21□□□□□ -1.26
SYNGAP1Q96PV0 CENPIP1-201ENST00000425713 902 ntBASIC7.21□□□□□ -1.26
SYNGAP1Q96PV0 DPRXP1-201ENST00000426312 460 ntBASIC7.21□□□□□ -1.26
SYNGAP1Q96PV0 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC7.21□□□□□ -1.26
SYNGAP1Q96PV0 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC7.21□□□□□ -1.26
SYNGAP1Q96PV0 RPL23AP19-201ENST00000436229 369 ntBASIC7.21□□□□□ -1.26
SYNGAP1Q96PV0 YWHAZP7-201ENST00000436906 631 ntBASIC7.21□□□□□ -1.26
SYNGAP1Q96PV0 DNAJC19P5-201ENST00000443295 316 ntBASIC7.21□□□□□ -1.26
SYNGAP1Q96PV0 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SYNGAP1Q96PV0 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC7.21□□□□□ -1.26
SYNGAP1Q96PV0 AC105918.1-201ENST00000474399 838 ntBASIC7.21□□□□□ -1.26
SYNGAP1Q96PV0 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.21□□□□□ -1.26
SYNGAP1Q96PV0 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC7.21□□□□□ -1.26
SYNGAP1Q96PV0 OR8G3P-201ENST00000533406 921 ntBASIC7.21□□□□□ -1.26
SYNGAP1Q96PV0 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms