Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.89□□□□□ -1.63
COL21A1Q96P44 AC046176.1-201ENST00000435260 1170 ntBASIC4.89□□□□□ -1.63
COL21A1Q96P44 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.89□□□□□ -1.63
COL21A1Q96P44 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.89□□□□□ -1.63
COL21A1Q96P44 AC104634.1-201ENST00000452720 462 ntBASIC4.89□□□□□ -1.63
COL21A1Q96P44 RNA5SP103-201ENST00000459503 118 ntBASIC4.89□□□□□ -1.63
COL21A1Q96P44 AC108161.1-201ENST00000461060 402 ntBASIC4.89□□□□□ -1.63
COL21A1Q96P44 RN7SL189P-201ENST00000468631 289 ntBASIC4.89□□□□□ -1.63
COL21A1Q96P44 AC074386.1-201ENST00000476560 767 ntBASIC4.89□□□□□ -1.63
COL21A1Q96P44 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.89□□□□□ -1.63
COL21A1Q96P44 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.89□□□□□ -1.63
COL21A1Q96P44 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.89□□□□□ -1.63
COL21A1Q96P44 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.89□□□□□ -1.63
COL21A1Q96P44 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
COL21A1Q96P44 MIR4489-201ENST00000578869 62 ntBASIC4.89□□□□□ -1.63
COL21A1Q96P44 NPM1P45-201ENST00000583151 559 ntBASIC4.89□□□□□ -1.63
COL21A1Q96P44 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.89□□□□□ -1.63
COL21A1Q96P44 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.89□□□□□ -1.63
COL21A1Q96P44 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.89□□□□□ -1.63
COL21A1Q96P44 AC015849.6-201ENST00000605454 474 ntBASIC4.89□□□□□ -1.63
COL21A1Q96P44 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.89□□□□□ -1.63
COL21A1Q96P44 AL139407.1-201ENST00000613826 1175 ntBASIC4.89□□□□□ -1.63
COL21A1Q96P44 MIR6826-201ENST00000617808 98 ntBASIC4.89□□□□□ -1.63
COL21A1Q96P44 AC008115.4-201ENST00000619780 775 ntBASIC4.89□□□□□ -1.63
COL21A1Q96P44 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.89□□□□□ -1.63
COL21A1Q96P44 MTCO1P1-201ENST00000624263 1081 ntBASIC4.89□□□□□ -1.63
COL21A1Q96P44 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.89□□□□□ -1.63
COL21A1Q96P44 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL21A1Q96P44 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL21A1Q96P44 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
COL21A1Q96P44 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.89□□□□□ -1.63
COL21A1Q96P44 AL022393.1-201ENST00000625142 1677 ntBASIC4.89□□□□□ -1.63
COL21A1Q96P44 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL21A1Q96P44 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL21A1Q96P44 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.89□□□□□ -1.63
COL21A1Q96P44 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL21A1Q96P44 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL21A1Q96P44 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL21A1Q96P44 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL21A1Q96P44 AL672167.1-204ENST00000641875 3017 ntBASIC4.88□□□□□ -1.63
COL21A1Q96P44 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL21A1Q96P44 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL21A1Q96P44 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 RN7SKP229-201ENST00000410465 302 ntBASIC4.88□□□□□ -1.63
COL21A1Q96P44 AP000534.2-201ENST00000412729 568 ntBASIC4.88□□□□□ -1.63
COL21A1Q96P44 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 AC108075.1-201ENST00000424692 529 ntBASIC4.88□□□□□ -1.63
COL21A1Q96P44 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 RPL7P6-201ENST00000480903 738 ntBASIC4.88□□□□□ -1.63
COL21A1Q96P44 RPS4XP1-201ENST00000482189 787 ntBASIC4.88□□□□□ -1.63
COL21A1Q96P44 AC024558.1-201ENST00000505008 528 ntBASIC4.88□□□□□ -1.63
COL21A1Q96P44 PGAM1P13-201ENST00000507497 754 ntBASIC4.88□□□□□ -1.63
COL21A1Q96P44 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 BNIP3P1-201ENST00000547295 580 ntBASIC4.88□□□□□ -1.63
COL21A1Q96P44 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 AC004825.1-201ENST00000555068 586 ntBASIC4.88□□□□□ -1.63
COL21A1Q96P44 RN7SL435P-201ENST00000584418 282 ntBASIC4.88□□□□□ -1.63
COL21A1Q96P44 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 AC069307.1-201ENST00000602820 447 ntBASIC4.88□□□□□ -1.63
COL21A1Q96P44 AL512329.2-201ENST00000607350 548 ntBASIC4.88□□□□□ -1.63
COL21A1Q96P44 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 AC239803.2-201ENST00000610161 430 ntBASIC4.88□□□□□ -1.63
COL21A1Q96P44 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 CYP4F35P-202ENST00000636121 390 ntBASIC4.88□□□□□ -1.63
COL21A1Q96P44 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 STX3-208ENST00000641815 3236 ntBASIC4.88□□□□□ -1.63
COL21A1Q96P44 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL21A1Q96P44 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.88□□□□□ -1.63
COL21A1Q96P44 AC063976.2-201ENST00000425667 3556 ntBASIC4.88□□□□□ -1.63
COL21A1Q96P44 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
COL21A1Q96P44 AC006210.2-201ENST00000367074 1545 ntBASIC4.87□□□□□ -1.63
COL21A1Q96P44 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL21A1Q96P44 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL21A1Q96P44 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL21A1Q96P44 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
COL21A1Q96P44 AC083843.2-201ENST00000568248 6253 ntBASIC4.87□□□□□ -1.63
COL21A1Q96P44 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.87□□□□□ -1.63
COL21A1Q96P44 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms