Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 KARSP1-201ENST00000451871 1752 ntBASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 STX3-208ENST00000641815 3236 ntBASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 AL034549.2-201ENST00000618285 3373 ntBASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 MIR133B-201ENST00000362210 119 ntBASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 RNA5SP335-201ENST00000363817 110 ntBASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 AL133388.1-201ENST00000404509 287 ntBASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 AMZ2P2-201ENST00000406819 1057 ntBASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 RN7SKP286-201ENST00000410894 299 ntBASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 AL590806.1-201ENST00000415818 853 ntBASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 AL356806.1-201ENST00000422524 916 ntBASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 KCTD9P1-201ENST00000430462 1167 ntBASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 RPS29P14-201ENST00000431518 171 ntBASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 NDUFA5P1-201ENST00000433858 341 ntBASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 AL606490.8-201ENST00000441624 319 ntBASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 MORF4L1P4-201ENST00000450245 976 ntBASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 RANP1-206ENST00000455094 651 ntBASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 RN7SL814P-201ENST00000487715 300 ntBASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 AL049874.2-201ENST00000492636 288 ntBASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 AC009597.2-201ENST00000604659 592 ntBASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 AC104695.2-201ENST00000605056 775 ntBASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 AC126175.1-201ENST00000617041 758 ntBASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 AC011755.1-201ENST00000623763 2049 ntBASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 AC006210.2-201ENST00000367074 1545 ntBASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 AC022417.1-201ENST00000624768 1303 ntBASIC5.23□□□□□ -1.57
PDLIM5Q96HC4 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 CASC19-248ENST00000641674 1356 ntBASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 TMSB4XP4-201ENST00000323496 618 ntBASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 AL606490.7-201ENST00000433136 191 ntBASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 AC090018.1-201ENST00000434369 367 ntBASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 AC012075.1-201ENST00000436549 580 ntBASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 AL138899.2-201ENST00000439139 499 ntBASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 FHP1-201ENST00000442741 703 ntBASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 NOP56P2-201ENST00000447491 769 ntBASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 YWHAEP1-201ENST00000453697 763 ntBASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 RPL7P40-201ENST00000481703 745 ntBASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 RPL7P41-201ENST00000485823 957 ntBASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 RN7SL466P-201ENST00000497546 295 ntBASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 NPM1P35-201ENST00000533043 868 ntBASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms