Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RPL7P16-201ENST00000479738 738 ntBASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 TOMM20P2-201ENST00000540082 421 ntBASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 AP002373.2-201ENST00000541631 1060 ntBASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 TVP23CP2-201ENST00000571473 623 ntBASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 AP000919.1-201ENST00000582850 985 ntBASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 MAPK10-328ENST00000641553 4009 ntBASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 AL450345.1-202ENST00000605741 3881 ntBASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 AL031123.3-201ENST00000623345 1837 ntBASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 SNURFL-201ENST00000309296 343 ntBASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 U3.3-201ENST00000362986 216 ntBASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 AC245028.1-201ENST00000423259 256 ntBASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 CYCSP24-201ENST00000445119 316 ntBASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 AL354714.3-201ENST00000447284 493 ntBASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 AC000111.2-201ENST00000448200 210 ntBASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.24□□□□□ -1.57
SHROOM3Q8TF72 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 BCORP1-203ENST00000513194 5093 ntBASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 MAPK10-304ENST00000641341 3984 ntBASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 RNA5SP187-201ENST00000384400 119 ntBASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 RPL17P50-201ENST00000396131 546 ntBASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 SNORA77-201ENST00000408716 125 ntBASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 RPL12P9-201ENST00000412942 488 ntBASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 RPS3AP53-201ENST00000454716 778 ntBASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 AC079168.1-201ENST00000458741 345 ntBASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 AC040958.1-201ENST00000561102 201 ntBASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 AC008814.1-201ENST00000603797 406 ntBASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 AC011493.1-201ENST00000596753 1632 ntBASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
SHROOM3Q8TF72 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 DDX39BP1-205ENST00000422507 192 ntBASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 BX323845.1-201ENST00000432417 179 ntBASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 PRPF38AP2-201ENST00000438179 851 ntBASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 AL161747.1-201ENST00000480068 358 ntBASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 RPL23AP72-201ENST00000492447 435 ntBASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 OR5AN2P-201ENST00000534535 896 ntBASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 EIF3FP1-201ENST00000613970 806 ntBASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 AC068446.1-201ENST00000556425 1549 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms