Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 RPL11P3-201ENST00000395256 523 ntBASIC3.55□□□□□ -1.84
SCXQ7RTU7 MRM2-202ENST00000407040 582 ntTSL 3 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 AC096644.3-201ENST00000416788 338 ntBASIC3.55□□□□□ -1.84
SCXQ7RTU7 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 AC007394.1-201ENST00000421941 531 ntBASIC3.55□□□□□ -1.84
SCXQ7RTU7 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 VN1R21P-201ENST00000426703 765 ntBASIC3.55□□□□□ -1.84
SCXQ7RTU7 RPL7L1P9-201ENST00000431298 745 ntBASIC3.55□□□□□ -1.84
SCXQ7RTU7 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SCXQ7RTU7 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SCXQ7RTU7 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 AL359265.1-201ENST00000440296 795 ntBASIC3.55□□□□□ -1.84
SCXQ7RTU7 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 TCEA1P3-201ENST00000443005 880 ntBASIC3.55□□□□□ -1.84
SCXQ7RTU7 RPS23P9-201ENST00000448848 438 ntBASIC3.55□□□□□ -1.84
SCXQ7RTU7 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 RPL7P45-201ENST00000455851 743 ntBASIC3.55□□□□□ -1.84
SCXQ7RTU7 RPS4XP1-201ENST00000482189 787 ntBASIC3.55□□□□□ -1.84
SCXQ7RTU7 PDCL3P4-201ENST00000489621 720 ntBASIC3.55□□□□□ -1.84
SCXQ7RTU7 RN7SL591P-201ENST00000496150 292 ntBASIC3.55□□□□□ -1.84
SCXQ7RTU7 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 RNA5SP228-201ENST00000516232 133 ntBASIC3.55□□□□□ -1.84
SCXQ7RTU7 CDC42P3-201ENST00000518493 633 ntBASIC3.55□□□□□ -1.84
SCXQ7RTU7 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 AL121594.2-201ENST00000541658 472 ntBASIC3.55□□□□□ -1.84
SCXQ7RTU7 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 AC126615.2-201ENST00000553003 515 ntBASIC3.55□□□□□ -1.84
SCXQ7RTU7 AL049779.2-201ENST00000553847 315 ntBASIC3.55□□□□□ -1.84
SCXQ7RTU7 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 SULT1C2P2-201ENST00000562517 294 ntBASIC3.55□□□□□ -1.84
SCXQ7RTU7 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 CASC22-201ENST00000569713 386 ntTSL 5 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SCXQ7RTU7 FAM106CP-201ENST00000582212 507 ntBASIC3.55□□□□□ -1.84
SCXQ7RTU7 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 CDC42EP3P1-201ENST00000601004 764 ntBASIC3.55□□□□□ -1.84
SCXQ7RTU7 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SCXQ7RTU7 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 AL118522.2-201ENST00000616045 615 ntBASIC3.55□□□□□ -1.84
SCXQ7RTU7 AP002967.1-201ENST00000624203 539 ntBASIC3.55□□□□□ -1.84
SCXQ7RTU7 AC136428.4-201ENST00000634254 1155 ntBASIC3.55□□□□□ -1.84
SCXQ7RTU7 METTL15-211ENST00000634762 718 ntTSL 5 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 AC138627.1-204ENST00000641894 765 ntBASIC3.55□□□□□ -1.84
SCXQ7RTU7 MFSD8-239ENST00000641590 2479 ntBASIC3.55□□□□□ -1.84
SCXQ7RTU7 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 PWAR1-201ENST00000624188 2414 ntBASIC3.55□□□□□ -1.84
SCXQ7RTU7 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SCXQ7RTU7 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SCXQ7RTU7 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SCXQ7RTU7 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC3.55□□□□□ -1.84
SCXQ7RTU7 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC3.55□□□□□ -1.84
SCXQ7RTU7 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SCXQ7RTU7 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SCXQ7RTU7 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SCXQ7RTU7 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC3.54□□□□□ -1.84
SCXQ7RTU7 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
SCXQ7RTU7 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SCXQ7RTU7 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
SCXQ7RTU7 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC3.54□□□□□ -1.84
SCXQ7RTU7 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC3.54□□□□□ -1.84
SCXQ7RTU7 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
SCXQ7RTU7 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
SCXQ7RTU7 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SCXQ7RTU7 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC3.54□□□□□ -1.84
SCXQ7RTU7 WAC-209ENST00000428935 1320 ntTSL 2 BASIC3.54□□□□□ -1.84
SCXQ7RTU7 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
SCXQ7RTU7 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
SCXQ7RTU7 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SCXQ7RTU7 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC3.54□□□□□ -1.84
SCXQ7RTU7 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SCXQ7RTU7 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
SCXQ7RTU7 MT-RNR1-201ENST00000389680 954 ntBASIC3.54□□□□□ -1.84
SCXQ7RTU7 MIR937-201ENST00000401271 86 ntBASIC3.54□□□□□ -1.84
SCXQ7RTU7 AL590609.2-201ENST00000421430 368 ntBASIC3.54□□□□□ -1.84
SCXQ7RTU7 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC3.54□□□□□ -1.84
SCXQ7RTU7 AC009784.1-201ENST00000426484 460 ntBASIC3.54□□□□□ -1.84
SCXQ7RTU7 AL139148.1-201ENST00000427122 680 ntBASIC3.54□□□□□ -1.84
SCXQ7RTU7 NANOGP4-201ENST00000427230 913 ntBASIC3.54□□□□□ -1.84
SCXQ7RTU7 OR6D1P-201ENST00000436165 939 ntBASIC3.54□□□□□ -1.84
SCXQ7RTU7 PTMAP6-201ENST00000439110 327 ntBASIC3.54□□□□□ -1.84
SCXQ7RTU7 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC3.54□□□□□ -1.84
SCXQ7RTU7 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC3.54□□□□□ -1.84
SCXQ7RTU7 AURKAPS1-201ENST00000451805 1212 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms