Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 SNORA11B-201ENST00000408175 129 ntBASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 CBX1P3-201ENST00000413296 527 ntBASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 AC017019.1-201ENST00000426129 261 ntBASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 AL157385.1-201ENST00000446973 268 ntBASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 AC090114.3-201ENST00000479267 829 ntBASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 RPL7P41-201ENST00000485823 957 ntBASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 AC069304.1-201ENST00000491593 704 ntBASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 AP005901.4-201ENST00000577336 569 ntBASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 MIR4472-2-201ENST00000582069 67 ntBASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 AC008814.1-201ENST00000603797 406 ntBASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 AC009597.2-201ENST00000604659 592 ntBASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 RNU6-84P-201ENST00000607737 102 ntBASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 Z95327.3-201ENST00000610385 572 ntBASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 MIR7155-201ENST00000615925 56 ntBASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 AC015660.5-201ENST00000623238 564 ntBASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 AC099494.2-201ENST00000623371 978 ntBASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
RFWD3Q6PCD5 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 PANDAR-201ENST00000629595 1506 ntBASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 OR9G4-201ENST00000302957 984 ntBASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 NPM1P40-201ENST00000412758 733 ntBASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 RPS4XP16-201ENST00000427198 791 ntBASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 GAPDHP58-201ENST00000438477 1006 ntBASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 RPS29P10-201ENST00000439197 166 ntBASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 RPL7AP6-201ENST00000477943 801 ntBASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 AC008410.1-201ENST00000483777 339 ntBASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 AC004453.1-201ENST00000487895 408 ntBASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 AL049874.2-201ENST00000492636 288 ntBASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 NDUFA5P12-201ENST00000503796 343 ntBASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 AC087763.1-201ENST00000603391 286 ntBASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 AC011626.1-201ENST00000604710 562 ntBASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 AC090510.2-201ENST00000617465 629 ntBASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
RFWD3Q6PCD5 TRIM51GP-201ENST00000534741 1350 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms