Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC022417.1-201ENST00000624768 1303 ntBASIC4.85□□□□□ -1.63
NIPAL3Q6P499 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 AC112198.2-201ENST00000426589 6996 ntBASIC4.84□□□□□ -1.63
NIPAL3Q6P499 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 VPS35P1-201ENST00000563400 1518 ntBASIC4.84□□□□□ -1.63
NIPAL3Q6P499 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 RNU1-19P-201ENST00000363306 165 ntBASIC4.84□□□□□ -1.63
NIPAL3Q6P499 RNU6-819P-201ENST00000364116 107 ntBASIC4.84□□□□□ -1.63
NIPAL3Q6P499 RNU6-670P-201ENST00000364312 104 ntBASIC4.84□□□□□ -1.63
NIPAL3Q6P499 RNU4-7P-201ENST00000364758 141 ntBASIC4.84□□□□□ -1.63
NIPAL3Q6P499 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 AL136131.1-201ENST00000406079 803 ntBASIC4.84□□□□□ -1.63
NIPAL3Q6P499 RNU6-564P-201ENST00000410983 104 ntBASIC4.84□□□□□ -1.63
NIPAL3Q6P499 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 RFESDP1-201ENST00000422350 461 ntBASIC4.84□□□□□ -1.63
NIPAL3Q6P499 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 AC124944.2-201ENST00000429866 1242 ntBASIC4.84□□□□□ -1.63
NIPAL3Q6P499 GSTM5P1-201ENST00000434751 660 ntBASIC4.84□□□□□ -1.63
NIPAL3Q6P499 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 AC105399.1-202ENST00000447303 205 ntBASIC4.84□□□□□ -1.63
NIPAL3Q6P499 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.84□□□□□ -1.63
NIPAL3Q6P499 AC069277.2-201ENST00000454211 432 ntBASIC4.84□□□□□ -1.63
NIPAL3Q6P499 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.84□□□□□ -1.63
NIPAL3Q6P499 RPL35AP19-201ENST00000469425 329 ntBASIC4.84□□□□□ -1.63
NIPAL3Q6P499 AL136038.1-201ENST00000497246 351 ntBASIC4.84□□□□□ -1.63
NIPAL3Q6P499 SNORA70.17-201ENST00000516449 133 ntBASIC4.84□□□□□ -1.63
NIPAL3Q6P499 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 AC009268.1-201ENST00000561352 1203 ntBASIC4.84□□□□□ -1.63
NIPAL3Q6P499 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 AC009852.2-201ENST00000567898 485 ntBASIC4.84□□□□□ -1.63
NIPAL3Q6P499 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 AC012146.2-201ENST00000576545 416 ntBASIC4.84□□□□□ -1.63
NIPAL3Q6P499 SNX6P1-201ENST00000601728 1224 ntBASIC4.84□□□□□ -1.63
NIPAL3Q6P499 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 MIR8080-201ENST00000622224 89 ntBASIC4.84□□□□□ -1.63
NIPAL3Q6P499 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.84□□□□□ -1.63
NIPAL3Q6P499 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.84□□□□□ -1.64
NIPAL3Q6P499 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
NIPAL3Q6P499 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
NIPAL3Q6P499 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.84□□□□□ -1.64
NIPAL3Q6P499 AC010266.2-201ENST00000564741 3255 ntBASIC4.84□□□□□ -1.64
NIPAL3Q6P499 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 CASC19-281ENST00000642118 1554 ntBASIC4.83□□□□□ -1.64
NIPAL3Q6P499 MTCO1P8-201ENST00000416914 1523 ntBASIC4.83□□□□□ -1.64
NIPAL3Q6P499 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 AC104623.2-202ENST00000623477 4002 ntBASIC4.83□□□□□ -1.64
NIPAL3Q6P499 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 RNA5SP234-201ENST00000363916 119 ntBASIC4.83□□□□□ -1.64
NIPAL3Q6P499 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 SNORA16A-201ENST00000384342 137 ntBASIC4.83□□□□□ -1.64
NIPAL3Q6P499 SNORD65-201ENST00000391079 73 ntBASIC4.83□□□□□ -1.64
NIPAL3Q6P499 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 MTCO1P45-201ENST00000431457 267 ntBASIC4.83□□□□□ -1.64
NIPAL3Q6P499 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 RPL12P17-201ENST00000432393 498 ntBASIC4.83□□□□□ -1.64
NIPAL3Q6P499 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 XKRYP6-201ENST00000440468 1116 ntBASIC4.83□□□□□ -1.64
NIPAL3Q6P499 XKRYP3-201ENST00000442113 1116 ntBASIC4.83□□□□□ -1.64
NIPAL3Q6P499 AL157385.1-201ENST00000446973 268 ntBASIC4.83□□□□□ -1.64
NIPAL3Q6P499 AC016724.1-201ENST00000453215 421 ntBASIC4.83□□□□□ -1.64
NIPAL3Q6P499 AL133244.1-201ENST00000456007 258 ntBASIC4.83□□□□□ -1.64
NIPAL3Q6P499 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 AC104629.2-201ENST00000468627 598 ntBASIC4.83□□□□□ -1.64
NIPAL3Q6P499 AC092754.1-201ENST00000472975 479 ntBASIC4.83□□□□□ -1.64
NIPAL3Q6P499 LARP7P4-201ENST00000481075 878 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 191 ms