Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RPS18P13-201ENST00000461260 454 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 RPSAP39-201ENST00000467439 883 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 RN7SL259P-201ENST00000478499 253 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 RPL7P51-201ENST00000490532 749 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 SLC25A15P5-201ENST00000508033 253 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 RN7SKP24-201ENST00000515888 284 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 RPS20-202ENST00000518875 671 ntTSL 2 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 COX6B1P4-201ENST00000519826 484 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 NCAPGP2-201ENST00000557911 754 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 CYCSP2-201ENST00000558168 301 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 AC048383.1-201ENST00000558226 527 ntTSL 4 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 AC090415.1-201ENST00000581877 847 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 RPL26P30-202ENST00000602923 645 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 AL355297.3-201ENST00000604082 446 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 RNU6-87P-201ENST00000607561 108 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 AC130324.3-201ENST00000614165 542 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 PLCE1P1-201ENST00000622094 305 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 TTLL9-211ENST00000620043 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
VARS2Q5ST30 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VARS2Q5ST30 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VARS2Q5ST30 ZNF512-201ENST00000355467 3541 ntAPPRIS P2 TSL 2 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
VARS2Q5ST30 METTL7A-203ENST00000548553 4076 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 PALLD-206ENST00000505667 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
VARS2Q5ST30 EYA4-213ENST00000531901 2892 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC8.35□□□□□ -1.07
VARS2Q5ST30 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC8.35□□□□□ -1.07
VARS2Q5ST30 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VARS2Q5ST30 AC011978.2-201ENST00000569835 2054 ntBASIC8.34□□□□□ -1.07
VARS2Q5ST30 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VARS2Q5ST30 A2ML1-205ENST00000539547 3460 ntTSL 2 BASIC8.34□□□□□ -1.07
VARS2Q5ST30 WDR75-201ENST00000314761 2701 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VARS2Q5ST30 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VARS2Q5ST30 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC8.34□□□□□ -1.07
VARS2Q5ST30 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VARS2Q5ST30 AC009148.1-201ENST00000570148 2693 ntBASIC8.34□□□□□ -1.07
VARS2Q5ST30 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VARS2Q5ST30 AC110926.1-201ENST00000412499 2825 ntBASIC8.34□□□□□ -1.07
VARS2Q5ST30 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VARS2Q5ST30 RNU6-713P-201ENST00000384761 107 ntBASIC8.34□□□□□ -1.07
VARS2Q5ST30 MIR525-201ENST00000384978 85 ntBASIC8.34□□□□□ -1.07
VARS2Q5ST30 ARF4P3-201ENST00000397387 509 ntBASIC8.34□□□□□ -1.07
VARS2Q5ST30 KRT18P52-201ENST00000404956 846 ntBASIC8.34□□□□□ -1.07
VARS2Q5ST30 RPSAP44-201ENST00000406712 884 ntBASIC8.34□□□□□ -1.07
VARS2Q5ST30 MAST4-207ENST00000407621 559 ntTSL 2 BASIC8.34□□□□□ -1.07
VARS2Q5ST30 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC8.34□□□□□ -1.07
VARS2Q5ST30 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC8.34□□□□□ -1.07
VARS2Q5ST30 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC8.34□□□□□ -1.07
VARS2Q5ST30 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VARS2Q5ST30 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VARS2Q5ST30 AC245014.1-201ENST00000427732 381 ntTSL 5 BASIC8.34□□□□□ -1.07
VARS2Q5ST30 AF228730.2-201ENST00000438784 848 ntBASIC8.34□□□□□ -1.07
VARS2Q5ST30 AL157414.2-201ENST00000442780 377 ntTSL 3 BASIC8.34□□□□□ -1.07
VARS2Q5ST30 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC8.34□□□□□ -1.07
VARS2Q5ST30 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC8.34□□□□□ -1.07
VARS2Q5ST30 RPL18AP17-201ENST00000455326 198 ntBASIC8.34□□□□□ -1.07
VARS2Q5ST30 NDUFAF4P3-201ENST00000456468 525 ntBASIC8.34□□□□□ -1.07
VARS2Q5ST30 GH2-204ENST00000456543 794 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VARS2Q5ST30 RPL7P22-201ENST00000466005 733 ntBASIC8.34□□□□□ -1.07
VARS2Q5ST30 AC018475.1-201ENST00000478358 465 ntBASIC8.34□□□□□ -1.07
VARS2Q5ST30 FO393415.2-201ENST00000480085 343 ntBASIC8.34□□□□□ -1.07
VARS2Q5ST30 AC090638.1-201ENST00000498296 909 ntBASIC8.34□□□□□ -1.07
VARS2Q5ST30 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC8.34□□□□□ -1.07
VARS2Q5ST30 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC8.34□□□□□ -1.07
VARS2Q5ST30 LIAS-206ENST00000513731 826 ntTSL 5 BASIC8.34□□□□□ -1.07
VARS2Q5ST30 AC117383.2-201ENST00000514722 322 ntBASIC8.34□□□□□ -1.07
VARS2Q5ST30 DEFB131D-201ENST00000526803 184 ntBASIC8.34□□□□□ -1.07
VARS2Q5ST30 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC8.34□□□□□ -1.07
VARS2Q5ST30 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC8.34□□□□□ -1.07
VARS2Q5ST30 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
VARS2Q5ST30 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC8.34□□□□□ -1.07
VARS2Q5ST30 RN7SL473P-201ENST00000580341 299 ntBASIC8.34□□□□□ -1.07
VARS2Q5ST30 MRO-208ENST00000588444 866 ntTSL 3 BASIC8.34□□□□□ -1.07
VARS2Q5ST30 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VARS2Q5ST30 AC073657.2-201ENST00000605661 303 ntBASIC8.34□□□□□ -1.07
VARS2Q5ST30 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VARS2Q5ST30 WDR75-207ENST00000631047 270 ntTSL 5 BASIC8.34□□□□□ -1.07
VARS2Q5ST30 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC8.34□□□□□ -1.07
VARS2Q5ST30 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VARS2Q5ST30 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VARS2Q5ST30 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
VARS2Q5ST30 AC096745.2-201ENST00000627783 1914 ntBASIC8.34□□□□□ -1.07
VARS2Q5ST30 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
VARS2Q5ST30 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VARS2Q5ST30 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC8.34□□□□□ -1.07
VARS2Q5ST30 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC8.34□□□□□ -1.07
VARS2Q5ST30 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms