Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 AC105402.1-201ENST00000413336 545 ntBASIC5.89□□□□□ -1.47
CCDC38Q502W7 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 OR51A6P-201ENST00000418680 1004 ntBASIC5.89□□□□□ -1.47
CCDC38Q502W7 MTCO1P43-201ENST00000431831 488 ntBASIC5.89□□□□□ -1.47
CCDC38Q502W7 AC007679.3-201ENST00000434035 414 ntBASIC5.89□□□□□ -1.47
CCDC38Q502W7 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 AP000936.3-201ENST00000438127 255 ntBASIC5.89□□□□□ -1.47
CCDC38Q502W7 TCEA1P3-201ENST00000443005 880 ntBASIC5.89□□□□□ -1.47
CCDC38Q502W7 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 AL096829.2-201ENST00000446582 742 ntBASIC5.89□□□□□ -1.47
CCDC38Q502W7 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC38Q502W7 RPL37P23-201ENST00000492641 294 ntBASIC5.89□□□□□ -1.47
CCDC38Q502W7 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 RNU5A-7P-201ENST00000515979 116 ntBASIC5.89□□□□□ -1.47
CCDC38Q502W7 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.89□□□□□ -1.47
CCDC38Q502W7 IGLV3-30-201ENST00000524362 298 ntBASIC5.89□□□□□ -1.47
CCDC38Q502W7 AC027369.2-201ENST00000528030 440 ntBASIC5.89□□□□□ -1.47
CCDC38Q502W7 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 AC008083.2-201ENST00000546707 476 ntBASIC5.89□□□□□ -1.47
CCDC38Q502W7 GLRXP2-201ENST00000555594 321 ntBASIC5.89□□□□□ -1.47
CCDC38Q502W7 MIR4776-2-201ENST00000580204 80 ntBASIC5.89□□□□□ -1.47
CCDC38Q502W7 AC005244.1-201ENST00000582566 339 ntBASIC5.89□□□□□ -1.47
CCDC38Q502W7 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 BNIP3P39-201ENST00000601077 554 ntBASIC5.89□□□□□ -1.47
CCDC38Q502W7 AP001437.1-201ENST00000608783 456 ntBASIC5.89□□□□□ -1.47
CCDC38Q502W7 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 MIR6133-201ENST00000617057 108 ntBASIC5.89□□□□□ -1.47
CCDC38Q502W7 AC024884.1-201ENST00000620583 399 ntBASIC5.89□□□□□ -1.47
CCDC38Q502W7 AC073593.1-201ENST00000624500 411 ntBASIC5.89□□□□□ -1.47
CCDC38Q502W7 AP001052.1-201ENST00000626421 99 ntBASIC5.89□□□□□ -1.47
CCDC38Q502W7 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC38Q502W7 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC38Q502W7 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC38Q502W7 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC38Q502W7 AC104260.2-201ENST00000623551 3497 ntBASIC5.89□□□□□ -1.47
CCDC38Q502W7 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC38Q502W7 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
CCDC38Q502W7 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC38Q502W7 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC38Q502W7 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC38Q502W7 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC38Q502W7 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC38Q502W7 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CCDC38Q502W7 RNU6-185P-201ENST00000384421 107 ntBASIC5.88□□□□□ -1.47
CCDC38Q502W7 RNU6-1005P-201ENST00000384519 107 ntBASIC5.88□□□□□ -1.47
CCDC38Q502W7 MIR620-201ENST00000385232 95 ntBASIC5.88□□□□□ -1.47
CCDC38Q502W7 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC38Q502W7 FO393419.3-201ENST00000428741 282 ntBASIC5.88□□□□□ -1.47
CCDC38Q502W7 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC38Q502W7 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC38Q502W7 MTCO1P52-201ENST00000433928 531 ntBASIC5.88□□□□□ -1.47
CCDC38Q502W7 YWHAZP2-201ENST00000440317 728 ntBASIC5.88□□□□□ -1.47
CCDC38Q502W7 MEMO1P4-201ENST00000453590 386 ntBASIC5.88□□□□□ -1.47
CCDC38Q502W7 PPIAP27-201ENST00000453800 265 ntBASIC5.88□□□□□ -1.47
CCDC38Q502W7 GEMIN2P1-201ENST00000454246 752 ntBASIC5.88□□□□□ -1.47
CCDC38Q502W7 AC093166.4-201ENST00000457867 318 ntBASIC5.88□□□□□ -1.47
CCDC38Q502W7 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.88□□□□□ -1.47
CCDC38Q502W7 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC38Q502W7 RPL21P47-201ENST00000483696 477 ntBASIC5.88□□□□□ -1.47
CCDC38Q502W7 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.88□□□□□ -1.47
CCDC38Q502W7 NAMPTP2-201ENST00000505629 1115 ntBASIC5.88□□□□□ -1.47
CCDC38Q502W7 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC38Q502W7 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC38Q502W7 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC38Q502W7 HMGB1P42-201ENST00000532126 553 ntBASIC5.88□□□□□ -1.47
CCDC38Q502W7 AC006512.2-201ENST00000543250 486 ntBASIC5.88□□□□□ -1.47
CCDC38Q502W7 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC38Q502W7 AC079905.1-201ENST00000549280 475 ntBASIC5.88□□□□□ -1.47
CCDC38Q502W7 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC38Q502W7 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.88□□□□□ -1.47
CCDC38Q502W7 RPA2P1-201ENST00000556557 721 ntBASIC5.88□□□□□ -1.47
CCDC38Q502W7 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC38Q502W7 CYCSP38-201ENST00000559840 322 ntBASIC5.88□□□□□ -1.47
CCDC38Q502W7 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC38Q502W7 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC38Q502W7 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC38Q502W7 AC018618.2-201ENST00000604770 446 ntBASIC5.88□□□□□ -1.47
CCDC38Q502W7 AC021851.1-201ENST00000608537 1082 ntBASIC5.88□□□□□ -1.47
CCDC38Q502W7 AC245014.3-201ENST00000618589 347 ntBASIC5.88□□□□□ -1.47
CCDC38Q502W7 AL591926.1-201ENST00000620542 217 ntBASIC5.88□□□□□ -1.47
CCDC38Q502W7 AC007342.8-201ENST00000623278 678 ntBASIC5.88□□□□□ -1.47
CCDC38Q502W7 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC38Q502W7 AC093875.1-201ENST00000623688 504 ntBASIC5.88□□□□□ -1.47
CCDC38Q502W7 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC38Q502W7 PCAT14-202ENST00000627127 3935 ntBASIC5.88□□□□□ -1.47
CCDC38Q502W7 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms