Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 MIR3691-201ENST00000578066 90 ntBASIC5.33□□□□□ -1.56
PTPN20Q4JDL3 AL139041.1-201ENST00000605480 610 ntBASIC5.33□□□□□ -1.56
PTPN20Q4JDL3 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.33□□□□□ -1.56
PTPN20Q4JDL3 AC073869.7-201ENST00000640874 297 ntBASIC5.33□□□□□ -1.56
PTPN20Q4JDL3 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN20Q4JDL3 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN20Q4JDL3 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PTPN20Q4JDL3 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.33□□□□□ -1.56
PTPN20Q4JDL3 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
PTPN20Q4JDL3 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN20Q4JDL3 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN20Q4JDL3 NXF4-202ENST00000416098 1465 ntBASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 C4BPAP1-201ENST00000415474 1893 ntBASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 AC013442.1-201ENST00000397347 228 ntBASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 MIR1178-201ENST00000408396 91 ntBASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 AL445213.1-201ENST00000412589 747 ntBASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 AL450023.3-201ENST00000440592 271 ntBASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 CYCSP24-201ENST00000445119 316 ntBASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 AL354714.3-201ENST00000447284 493 ntBASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 TCEA1P1-201ENST00000449716 880 ntBASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 RPS17P2-201ENST00000461663 408 ntBASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 AC006116.3-201ENST00000592968 361 ntBASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 OR51C1P-201ENST00000608504 942 ntBASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 AL139407.1-201ENST00000613826 1175 ntBASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.32□□□□□ -1.56
PTPN20Q4JDL3 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 ATP5HP3-201ENST00000396994 486 ntBASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 LRRC37BP1-201ENST00000398851 714 ntBASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 AC004980.3-201ENST00000447046 365 ntBASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 AL691482.1-201ENST00000453255 87 ntBASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 HMGB1P4-201ENST00000455362 567 ntBASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 HMGN2P25-201ENST00000486956 268 ntBASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 RNA5SP43-201ENST00000516559 110 ntBASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 AC008833.1-201ENST00000611633 691 ntBASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 BX005214.3-202ENST00000619809 325 ntBASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 AL355480.1-201ENST00000629041 99 ntBASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 AC073869.10-201ENST00000642016 354 ntBASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
PTPN20Q4JDL3 AC112198.2-201ENST00000426589 6996 ntBASIC5.3□□□□□ -1.56
PTPN20Q4JDL3 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
PTPN20Q4JDL3 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
PTPN20Q4JDL3 CR788268.1-201ENST00000603931 1809 ntBASIC5.3□□□□□ -1.56
PTPN20Q4JDL3 AC011447.7-201ENST00000624228 1590 ntBASIC5.3□□□□□ -1.56
PTPN20Q4JDL3 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.3□□□□□ -1.56
PTPN20Q4JDL3 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.3□□□□□ -1.56
PTPN20Q4JDL3 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
PTPN20Q4JDL3 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
PTPN20Q4JDL3 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PTPN20Q4JDL3 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms