Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDH1Q08174 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
PCDH1Q08174 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDH1Q08174 VN1R79P-201ENST00000593540 513 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 AC090578.1-201ENST00000604955 591 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 AC107214.2-201ENST00000608204 634 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDH1Q08174 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDH1Q08174 AC091768.1-201ENST00000609258 930 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 AC011472.4-201ENST00000615848 491 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 AL121890.2-201ENST00000617644 465 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 AL161420.1-201ENST00000619393 264 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDH1Q08174 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.7□□□□□ -1.34
PCDH1Q08174 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
PCDH1Q08174 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDH1Q08174 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDH1Q08174 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDH1Q08174 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDH1Q08174 CYP2G2P-201ENST00000594920 1485 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.7□□□□□ -1.34
PCDH1Q08174 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDH1Q08174 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDH1Q08174 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.7□□□□□ -1.34
PCDH1Q08174 MAPK10-383ENST00000642032 3390 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
PCDH1Q08174 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDH1Q08174 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDH1Q08174 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDH1Q08174 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDH1Q08174 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDH1Q08174 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDH1Q08174 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDH1Q08174 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDH1Q08174 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDH1Q08174 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.69□□□□□ -1.34
PCDH1Q08174 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDH1Q08174 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDH1Q08174 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDH1Q08174 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDH1Q08174 EEF1A1P16-201ENST00000325349 1414 ntBASIC6.69□□□□□ -1.34
PCDH1Q08174 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
PCDH1Q08174 MAPK10-344ENST00000641718 3746 ntBASIC6.69□□□□□ -1.34
PCDH1Q08174 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDH1Q08174 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDH1Q08174 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDH1Q08174 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDH1Q08174 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDH1Q08174 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
PCDH1Q08174 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDH1Q08174 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
PCDH1Q08174 MIR217-201ENST00000384817 110 ntBASIC6.69□□□□□ -1.34
PCDH1Q08174 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
PCDH1Q08174 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
PCDH1Q08174 MIR541-201ENST00000401360 84 ntBASIC6.69□□□□□ -1.34
PCDH1Q08174 MTCYBP36-201ENST00000404146 440 ntBASIC6.69□□□□□ -1.34
PCDH1Q08174 MIR1284-201ENST00000408337 120 ntBASIC6.69□□□□□ -1.34
PCDH1Q08174 LSM5-205ENST00000409952 687 ntTSL 4 BASIC6.69□□□□□ -1.34
PCDH1Q08174 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDH1Q08174 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDH1Q08174 GAPDHP69-201ENST00000425504 1008 ntBASIC6.69□□□□□ -1.34
PCDH1Q08174 AL009174.1-201ENST00000426577 416 ntBASIC6.69□□□□□ -1.34
PCDH1Q08174 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDH1Q08174 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDH1Q08174 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDH1Q08174 ARMC4P1-201ENST00000438905 707 ntBASIC6.69□□□□□ -1.34
PCDH1Q08174 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDH1Q08174 USP9YP8-201ENST00000441913 500 ntBASIC6.69□□□□□ -1.34
PCDH1Q08174 PSPHP1-201ENST00000450062 261 ntBASIC6.69□□□□□ -1.34
PCDH1Q08174 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDH1Q08174 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDH1Q08174 MED28P7-201ENST00000456611 530 ntBASIC6.69□□□□□ -1.34
PCDH1Q08174 MTND1P11-201ENST00000456661 876 ntBASIC6.69□□□□□ -1.34
PCDH1Q08174 AC013267.1-201ENST00000458227 267 ntBASIC6.69□□□□□ -1.34
PCDH1Q08174 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDH1Q08174 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.69□□□□□ -1.34
PCDH1Q08174 AP000797.1-201ENST00000478870 387 ntBASIC6.69□□□□□ -1.34
PCDH1Q08174 AC079382.1-201ENST00000493346 557 ntBASIC6.69□□□□□ -1.34
PCDH1Q08174 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDH1Q08174 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDH1Q08174 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDH1Q08174 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDH1Q08174 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDH1Q08174 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDH1Q08174 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDH1Q08174 AC010342.1-201ENST00000514047 877 ntBASIC6.69□□□□□ -1.34
PCDH1Q08174 SCARNA18.2-201ENST00000516882 84 ntBASIC6.69□□□□□ -1.34
PCDH1Q08174 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDH1Q08174 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDH1Q08174 AC137768.1-201ENST00000549998 553 ntBASIC6.69□□□□□ -1.34
PCDH1Q08174 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.69□□□□□ -1.34
PCDH1Q08174 AC004217.3-201ENST00000551552 878 ntBASIC6.69□□□□□ -1.34
PCDH1Q08174 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDH1Q08174 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDH1Q08174 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDH1Q08174 AL365503.1-201ENST00000605247 905 ntBASIC6.69□□□□□ -1.34
PCDH1Q08174 AP000894.4-201ENST00000610185 483 ntBASIC6.69□□□□□ -1.34
PCDH1Q08174 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC6.69□□□□□ -1.34
PCDH1Q08174 AL121782.1-201ENST00000611242 413 ntBASIC6.69□□□□□ -1.34
PCDH1Q08174 AL161931.1-201ENST00000612768 246 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms